| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960471
Identifier: 157960471
GI number: 157960471
Start: 796579
End: 797094
Strand: Direct
Name: 157960471
Synonym: Spea_0643
Alternate gene names: NA
Gene position: 796579-797094 (Clockwise)
Preceding gene: 157960470
Following gene: 157960472
Centisome position: 15.39
GC content: 33.33
Gene sequence:
>516_bases ATGTACAATATTAAAGAGTTAATTAAAAAAGAGGCGGTCTTAAAAGATAACTTTAAACAGCATTTTGTTACTTTTTTTCA GCAGTTTTCTTATGAAACACTCAATAAATCTGGAATTAAATTAACACCAATTGAGTCACATGACAGCCTCTTATCTGTAA GATATGGAAGTGGTTTATATCTGATTCTTACTGATTATATAAAAGATTCTAACCCATGCAATCTGGAAATTGGCGAGTTA AAAGTAATTTATCGAGGGCATGGACGCAGAATCAGAAAACGAGTTGAAAGTCATTTGTATAATTCGAAATATACCAATAA ATCAGACGGTACAAACTATACGGTTTGTATGAAGTTGAATGATGACAATGGCATTAACCTTAACGAAAAACCTTACTCAG ATTATAAATGGGCTGTAGTTCAACACCCAATGACTGATAGTAGTAAGACGATGAGAGAGCAAGCAGAACAAGGGTTCGAT GAGGTATATAATATGCCAATTGGATCCAATGCCTAA
Upstream 100 bases:
>100_bases TGGTAAGGCTTAAATAATAGGTTTATTAAATGCGCATGCGAGTTTTGCCAAATATACGCGCACTATATAAATGTTAGATA TATATGAGTAGTGTTTAGTT
Downstream 100 bases:
>100_bases CGAATAAGGATAGGCCGCGCGCAGTCGCGTCCTTATCCTGAGTGTTGAACAAGCCCGATTGATACCTTTATATAGTAAAT AGCGACGCGAGAGTTCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MYNIKELIKKEAVLKDNFKQHFVTFFQQFSYETLNKSGIKLTPIESHDSLLSVRYGSGLYLILTDYIKDSNPCNLEIGEL KVIYRGHGRRIRKRVESHLYNSKYTNKSDGTNYTVCMKLNDDNGINLNEKPYSDYKWAVVQHPMTDSSKTMREQAEQGFD EVYNMPIGSNA
Sequences:
>Translated_171_residues MYNIKELIKKEAVLKDNFKQHFVTFFQQFSYETLNKSGIKLTPIESHDSLLSVRYGSGLYLILTDYIKDSNPCNLEIGEL KVIYRGHGRRIRKRVESHLYNSKYTNKSDGTNYTVCMKLNDDNGINLNEKPYSDYKWAVVQHPMTDSSKTMREQAEQGFD EVYNMPIGSNA >Mature_171_residues MYNIKELIKKEAVLKDNFKQHFVTFFQQFSYETLNKSGIKLTPIESHDSLLSVRYGSGLYLILTDYIKDSNPCNLEIGEL KVIYRGHGRRIRKRVESHLYNSKYTNKSDGTNYTVCMKLNDDNGINLNEKPYSDYKWAVVQHPMTDSSKTMREQAEQGFD EVYNMPIGSNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19866; Mature: 19866
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNIKELIKKEAVLKDNFKQHFVTFFQQFSYETLNKSGIKLTPIESHDSLLSVRYGSGLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCEE LILTDYIKDSNPCNLEIGELKVIYRGHGRRIRKRVESHLYNSKYTNKSDGTNYTVCMKLN EEEEEHHCCCCCCCEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC DDNGINLNEKPYSDYKWAVVQHPMTDSSKTMREQAEQGFDEVYNMPIGSNA CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MYNIKELIKKEAVLKDNFKQHFVTFFQQFSYETLNKSGIKLTPIESHDSLLSVRYGSGLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCEE LILTDYIKDSNPCNLEIGELKVIYRGHGRRIRKRVESHLYNSKYTNKSDGTNYTVCMKLN EEEEEHHCCCCCCCEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC DDNGINLNEKPYSDYKWAVVQHPMTDSSKTMREQAEQGFDEVYNMPIGSNA CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA