| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is yeiJ [C]
Identifier: 157960463
GI number: 157960463
Start: 785435
End: 786661
Strand: Direct
Name: yeiJ [C]
Synonym: Spea_0634
Alternate gene names: 157960463
Gene position: 785435-786661 (Clockwise)
Preceding gene: 157960462
Following gene: 157960464
Centisome position: 15.18
GC content: 47.84
Gene sequence:
>1227_bases ATGGAAGTTTTCATCAGTTTGTTCGGCATGCTTTGTCTTATGGGCTTAGCGGTTGCACTATCAGAAAATAGAAAAGCAAT TAATCCTAGAACCGTACTCGGTGCGTTAGCATTTCAAGTCGCCTTTGGTGCATTTGTTATGTATGTGCCTATGGGGCAGG CGGTGCTTGATGGCGCATCAAATGGCGTGATGCACGTTATTGGTTACGCTAACGAAGGCTTAGCTTTCTTGTTTGGTGAC CTCGCGAAGTTTGGTGTTGGCTTTATCTTTGTGATTAACGTGCTATTTGTGGTGGTCTTCATCAGCGCATTAATCGCCGT ACTTTATTACCTTGGCATCATGCAGTTGGTTATTGGCCTGATTGGTGGCGGCTTATCTAAGCTACTGGGTTCAAGCCGTG CAGAATCGCTATCTGCGACAGCCAATATCTTTGTTGGCCCAATTGAAGCCCCTTCAATGGTACGTCCCTTTGTTAAGCAC ATGACTCGCTCTGAGCTATTCGCAGTAATGACTGGTGGTTTGGCATCAGTTGCGGGTGGCACCATGATTGGTTACATCCA GATGGGGGTTGACGTTAAATACGTGCTAACCGCCGCCTTTATGACGGCGCCTGCGGGCCTGCTATTTGCTAAGTTGATGT GGCCAGAAACTGAAACGCCACAAAACGACATCAAGAAAGTGATGGACGATGTGGCAGACAAACCAGCAAACGTACTCGAC GCAGCAGCCAGCGGCGCAGCTATGGGAATGCAGCAAGTATTGTCAGTGTCTGCGTTGCTATTAGCATTCGTGGCTCTTAT CGCCATGGTTAACGGTATGCTTGGCGGCATCGGCGGCTGGTTTGGTATTGAAGACCTGACGATGCAGGCTATCTTAGGTT ATATCTTGGCACCACTTGCTTGGGTGATGGGTGTACCTTGGAGCGAAGCGACTCAGGCTGCTTCATTTATCGGCCAGAAG ATGGTGATCAATGAATTTGTAGCCTATATAGACTTCTTAAAAGTATCCGACCAGCTATCAGAAAAGACCCAAATTATCAT CAGTTTTGCCCTGTGTGGCTTCGCTAACATCGGCTCATTAGCCATGGTGATTGGTGGTTTAGCGGCGCTTTGCCCTGAAC GTCGTCACGACTTAAGTGCACTAGGTATGAAGGCGTTAATAGCTGCTGCTCTAGCTAACTTAATGAGCGGTACCATTGCA GGCTTACTTTATAGCTTAGCGGGTTAA
Upstream 100 bases:
>100_bases AAAACTTTGTTTATCTTCGCCAAAAACAGCCAAATCCCTTGCGACAAAATTGCGTCTGTATACACTGCGCTCATATCAAG ACTTTAACGGTAATAAATGT
Downstream 100 bases:
>100_bases TTTTCCCATAAGCTTAGTTTGAAATCGTAGTATTTTTTATAAGAGTACTTGTTTACTAGCGCAAACAAGTACTCAACTTT TTAAGGAAGTATCATGACTC
Product: Na+ dependent nucleoside transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGASNGVMHVIGYANEGLAFLFGD LAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGLIGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKH MTRSELFAVMTGGLASVAGGTMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLAWVMGVPWSEATQAASFIGQK MVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSLAMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIA GLLYSLAG
Sequences:
>Translated_408_residues MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGASNGVMHVIGYANEGLAFLFGD LAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGLIGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKH MTRSELFAVMTGGLASVAGGTMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLAWVMGVPWSEATQAASFIGQK MVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSLAMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIA GLLYSLAG >Mature_408_residues MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGASNGVMHVIGYANEGLAFLFGD LAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGLIGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKH MTRSELFAVMTGGLASVAGGTMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLAWVMGVPWSEATQAASFIGQK MVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSLAMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIA GLLYSLAG
Specific function: Unknown
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI11545853, Length=365, Percent_Identity=39.1780821917808, Blast_Score=259, Evalue=2e-69, Organism=Homo sapiens, GI227116277, Length=418, Percent_Identity=33.9712918660287, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI42542381, Length=418, Percent_Identity=33.2535885167464, Blast_Score=245, Evalue=5e-65, Organism=Escherichia coli, GI1788485, Length=417, Percent_Identity=45.5635491606715, Blast_Score=337, Evalue=1e-93, Organism=Escherichia coli, GI1788488, Length=417, Percent_Identity=45.3237410071942, Blast_Score=320, Evalue=1e-88, Organism=Escherichia coli, GI1788737, Length=389, Percent_Identity=31.3624678663239, Blast_Score=186, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17560276, Length=404, Percent_Identity=31.9306930693069, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71991794, Length=399, Percent_Identity=31.328320802005, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI25146537, Length=202, Percent_Identity=31.6831683168317, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI45552519, Length=399, Percent_Identity=35.3383458646617, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI45552517, Length=399, Percent_Identity=35.3383458646617, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI19921868, Length=399, Percent_Identity=35.3383458646617, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI281360430, Length=404, Percent_Identity=34.1584158415842, Blast_Score=221, Evalue=7e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 42726; Mature: 42726
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGAS CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC NGVMHVIGYANEGLAFLFGDLAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGL CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKHMTRSELFAVMTGGLASVAGG HCCCHHHHHCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC TMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD HHEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WVMGVPWSEATQAASFIGQKMVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH AMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIAGLLYSLAG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGAS CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC NGVMHVIGYANEGLAFLFGDLAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGL CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKHMTRSELFAVMTGGLASVAGG HCCCHHHHHCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC TMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD HHEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WVMGVPWSEATQAASFIGQKMVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH AMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIAGLLYSLAG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]