| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960439
Identifier: 157960439
GI number: 157960439
Start: 753282
End: 753911
Strand: Direct
Name: 157960439
Synonym: Spea_0610
Alternate gene names: NA
Gene position: 753282-753911 (Clockwise)
Preceding gene: 157960438
Following gene: 157960440
Centisome position: 14.56
GC content: 42.86
Gene sequence:
>630_bases ATGAATAATGTTTCTATGGTGGCAAAAGCTGTTGGCTTAGCATTAGTTGTTGCAGTTTCATCGCCAGTTTTAGCTGCTGA AACTGAGAATGCTACAGCATCTGTAACAGTTAAAAATGCTTTTGAAATGGTAGTGGCTAAGCCATTGAATTTTGGTGAGA TTACTGCTGTGGTCGATCTGACTGATACTGATGGCGTAAGTGCCAGTATTACAATGTCTCCAAATCCGACTGAGCAGGCT ACAGTGGTAAATGGGGCTGGAAATTTGGCAACCATTAGATCATTAGTACCGGGTGAGCCAGGTGAAGTGACAGTCGCTGG TGTTGCACCATATTCTGAGTTAAGTGTTACTTTACCTGCAGGCACAACTAATGTTGTTGCATCTGCAGCAGCTCCGGGAT CACCTAAGTTTGTGTTAAGTGCTATAACAGCTTATATCACTTCAGGTGATCATGACGGTACGCTATATGCTGATGCAAAT AAGTTGACTGCAGACGGTCAAGGTAATGCGAGTTTCAATTTTGGTGGCACGTTAACTACTGATGTTTACGCTGCTGATAC CAACGTAATTGATAGACAGTATCAAGATGGTGAGTTCTCGGGTTCTTTCCCGATCACTGTCAGCTATTAA
Upstream 100 bases:
>100_bases TAATCAAGATTGATGTTAGTCGACGTTTTCTCATTAGTTATTAAAAAGTGTGTTGTGTCTAATAGTTAAAAATACAGATA ATAGTATAATGGAGTTTTAA
Downstream 100 bases:
>100_bases GAAAAAATAAACTTAGGTGGCTCAACGTTTGTTTAGCCACCTTATTTGTTCTAAGGCTAATTTTGAAACCAATCATATTT TTGATTTTTGGGGCGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MNNVSMVAKAVGLALVVAVSSPVLAAETENATASVTVKNAFEMVVAKPLNFGEITAVVDLTDTDGVSASITMSPNPTEQA TVVNGAGNLATIRSLVPGEPGEVTVAGVAPYSELSVTLPAGTTNVVASAAAPGSPKFVLSAITAYITSGDHDGTLYADAN KLTADGQGNASFNFGGTLTTDVYAADTNVIDRQYQDGEFSGSFPITVSY
Sequences:
>Translated_209_residues MNNVSMVAKAVGLALVVAVSSPVLAAETENATASVTVKNAFEMVVAKPLNFGEITAVVDLTDTDGVSASITMSPNPTEQA TVVNGAGNLATIRSLVPGEPGEVTVAGVAPYSELSVTLPAGTTNVVASAAAPGSPKFVLSAITAYITSGDHDGTLYADAN KLTADGQGNASFNFGGTLTTDVYAADTNVIDRQYQDGEFSGSFPITVSY >Mature_209_residues MNNVSMVAKAVGLALVVAVSSPVLAAETENATASVTVKNAFEMVVAKPLNFGEITAVVDLTDTDGVSASITMSPNPTEQA TVVNGAGNLATIRSLVPGEPGEVTVAGVAPYSELSVTLPAGTTNVVASAAAPGSPKFVLSAITAYITSGDHDGTLYADAN KLTADGQGNASFNFGGTLTTDVYAADTNVIDRQYQDGEFSGSFPITVSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21127; Mature: 21127
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVSMVAKAVGLALVVAVSSPVLAAETENATASVTVKNAFEMVVAKPLNFGEITAVVDL CCCHHHHHHHHHHEEEEEECCCEEEEECCCCEEEEEEHHHEEEEEECCCCCCCEEEEEEE TDTDGVSASITMSPNPTEQATVVNGAGNLATIRSLVPGEPGEVTVAGVAPYSELSVTLPA CCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEECC GTTNVVASAAAPGSPKFVLSAITAYITSGDHDGTLYADANKLTADGQGNASFNFGGTLTT CCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCEEEEECCEEEE DVYAADTNVIDRQYQDGEFSGSFPITVSY EEEECCCCCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure MNNVSMVAKAVGLALVVAVSSPVLAAETENATASVTVKNAFEMVVAKPLNFGEITAVVDL CCCHHHHHHHHHHEEEEEECCCEEEEECCCCEEEEEEHHHEEEEEECCCCCCCEEEEEEE TDTDGVSASITMSPNPTEQATVVNGAGNLATIRSLVPGEPGEVTVAGVAPYSELSVTLPA CCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEECC GTTNVVASAAAPGSPKFVLSAITAYITSGDHDGTLYADANKLTADGQGNASFNFGGTLTT CCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCEEEEECCEEEE DVYAADTNVIDRQYQDGEFSGSFPITVSY EEEECCCCCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA