Click here to switch to the map view.

The map label for this gene is yaeJ [H]

Identifier: 157960364

GI number: 157960364

Start: 658483

End: 658905

Strand: Reverse

Name: yaeJ [H]

Synonym: Spea_0535

Alternate gene names: 157960364

Gene position: 658905-658483 (Counterclockwise)

Preceding gene: 157960371

Following gene: 157960363

Centisome position: 12.73

GC content: 48.94

Gene sequence:

>423_bases
TTGGCGTTAATAAAAATCTCCAACTCAGTATCGATCCAAGATAGTGAACTCGAGTGGCAGTTTATCCGCTCTAGCGGCGC
TGGCGGACAGCACCTCAATAAGGTGTCTACTGCGGCGCAGCTGATCTTTGATATTAAAACCTCCTCTCTACCTGAATACT
ACCAGCAGCGCTTACTCGCCAAAGCGGATCACCGCATCACTAAAAGTGGCAAGATCATCATTAAATGTCAGCAGAGTCGT
AGCCAAGACTTTAATCGTCAAACCGCGCTGGAGCAGTTTATCGCTCTGGTTGCCAGTGTGAATGCGGTGCAGAAAAAGCG
TATCGCCACCAAGCCTACCAAAGGTAGCCAACGCCGCCGAGTCGATGCCAAGAAACAAAAAGGGGCGACTAAAGCCCTGA
GGCAAAACAAGTCTGGTTTTTAA

Upstream 100 bases:

>100_bases
GCCCTTATTTAGGCTAAAAGTCTGTTAATATTGACCTAAGGTAATTTAAGTCTGTGCTAAAAATTGATTTATCGACACAG
AAAGCAAGGGATGTGAATTT

Downstream 100 bases:

>100_bases
ACTCAGTTTTTAAATCTCTGTTTTAAAGCTATGTTTCAAATCTATGCAATTCAATATACAAAGAATCGGCCTGAATAATT
AGCACTTTCATCTTGTAAGG

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MALIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKTSSLPEYYQQRLLAKADHRITKSGKIIIKCQQSR
SQDFNRQTALEQFIALVASVNAVQKKRIATKPTKGSQRRRVDAKKQKGATKALRQNKSGF

Sequences:

>Translated_140_residues
MALIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKTSSLPEYYQQRLLAKADHRITKSGKIIIKCQQSR
SQDFNRQTALEQFIALVASVNAVQKKRIATKPTKGSQRRRVDAKKQKGATKALRQNKSGF
>Mature_139_residues
ALIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKTSSLPEYYQQRLLAKADHRITKSGKIIIKCQQSRS
QDFNRQTALEQFIALVASVNAVQKKRIATKPTKGSQRRRVDAKKQKGATKALRQNKSGF

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=132, Percent_Identity=50, Blast_Score=140, Evalue=4e-35,
Organism=Drosophila melanogaster, GI19921098, Length=132, Percent_Identity=34.8484848484849, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15659; Mature: 15528

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKTSSLPEYYQQRLLA
CEEEEECCCCEEECCCCHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KADHRITKSGKIIIKCQQSRSQDFNRQTALEQFIALVASVNAVQKKRIATKPTKGSQRRR
HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VDAKKQKGATKALRQNKSGF
CCHHHHCCHHHHHHCCCCCC
>Mature Secondary Structure 
ALIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKTSSLPEYYQQRLLA
EEEEECCCCEEECCCCHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KADHRITKSGKIIIKCQQSRSQDFNRQTALEQFIALVASVNAVQKKRIATKPTKGSQRRR
HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VDAKKQKGATKALRQNKSGF
CCHHHHCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]