| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960352
Identifier: 157960352
GI number: 157960352
Start: 637794
End: 638384
Strand: Direct
Name: 157960352
Synonym: Spea_0523
Alternate gene names: NA
Gene position: 637794-638384 (Clockwise)
Preceding gene: 157960351
Following gene: 157960355
Centisome position: 12.33
GC content: 42.13
Gene sequence:
>591_bases ATGAGCTGGATGGAATTTATCGTAGCCTTGCTGGACAAACTTATTTGGCCTGCGGTGTTGGTGTTTGGCGTTATCACCTT AAAACGGCCAATATCTAAGTTGATCCCCTTGGCTAAAAAGTTAAAGTTTAGGGAATTTGAAGTCGAGTTCGGTCAAGGCC TTAAAGCTGTGACAGAGCAGGCGCAAGGCGTGTTTCCTGAGTTAAAAACCGATAAGAAAAGCATGTTGATTGCATCGGCA AATAGCCTGCCTAACTCTGCGATTTTAGAAGCTTGGGAGCAAGTAGACTTAGCGGCTGAACAACTAATTAAATCTCACTG CGACAACATCACTTTAGATAAAAATACCCGCTATAAACATATCGAGAATATTTTGATCAGCGAAGCCTTGATCAATACTA AGCAAGGCAAGCTATTTAGCGAGCTGCGCCAGTTACGTAACAAAGTCGCTCATGCGGTGGGATATGAGGTGGGTAAGGCT GAATCGATTCAATATATAGAGCTGTGTTTTAAGTTGATAGAGCACCTAAACAGATTAACGCCTTCGATGCTGCATGCTTG TGAAACACAAATTGAACAAGCAGTTAGTTAA
Upstream 100 bases:
>100_bases AAGCAAAAGGTAAAATAACCACTAGAGCACCATTTTATTCAGGTGGTGAAACTTGCTATCCTGAACACAGAAAAACAGCG AATACATGGAAGGATACTGA
Downstream 100 bases:
>100_bases TAGGTTTCATTAGCGCTTGTCTAAATGAAACTGTTACTGACTGCTCGGGTGTCAGCTATGTGTTCCTGTTCGTTAACTCT TGGCTCTTAGGTACATATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSWMEFIVALLDKLIWPAVLVFGVITLKRPISKLIPLAKKLKFREFEVEFGQGLKAVTEQAQGVFPELKTDKKSMLIASA NSLPNSAILEAWEQVDLAAEQLIKSHCDNITLDKNTRYKHIENILISEALINTKQGKLFSELRQLRNKVAHAVGYEVGKA ESIQYIELCFKLIEHLNRLTPSMLHACETQIEQAVS
Sequences:
>Translated_196_residues MSWMEFIVALLDKLIWPAVLVFGVITLKRPISKLIPLAKKLKFREFEVEFGQGLKAVTEQAQGVFPELKTDKKSMLIASA NSLPNSAILEAWEQVDLAAEQLIKSHCDNITLDKNTRYKHIENILISEALINTKQGKLFSELRQLRNKVAHAVGYEVGKA ESIQYIELCFKLIEHLNRLTPSMLHACETQIEQAVS >Mature_195_residues SWMEFIVALLDKLIWPAVLVFGVITLKRPISKLIPLAKKLKFREFEVEFGQGLKAVTEQAQGVFPELKTDKKSMLIASAN SLPNSAILEAWEQVDLAAEQLIKSHCDNITLDKNTRYKHIENILISEALINTKQGKLFSELRQLRNKVAHAVGYEVGKAE SIQYIELCFKLIEHLNRLTPSMLHACETQIEQAVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22201; Mature: 22070
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWMEFIVALLDKLIWPAVLVFGVITLKRPISKLIPLAKKLKFREFEVEFGQGLKAVTEQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AQGVFPELKTDKKSMLIASANSLPNSAILEAWEQVDLAAEQLIKSHCDNITLDKNTRYKH HHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH IENILISEALINTKQGKLFSELRQLRNKVAHAVGYEVGKAESIQYIELCFKLIEHLNRLT HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PSMLHACETQIEQAVS HHHHHHHHHHHHHHCC >Mature Secondary Structure SWMEFIVALLDKLIWPAVLVFGVITLKRPISKLIPLAKKLKFREFEVEFGQGLKAVTEQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AQGVFPELKTDKKSMLIASANSLPNSAILEAWEQVDLAAEQLIKSHCDNITLDKNTRYKH HHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH IENILISEALINTKQGKLFSELRQLRNKVAHAVGYEVGKAESIQYIELCFKLIEHLNRLT HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PSMLHACETQIEQAVS HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA