| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960327
Identifier: 157960327
GI number: 157960327
Start: 608893
End: 611712
Strand: Direct
Name: 157960327
Synonym: Spea_0498
Alternate gene names: NA
Gene position: 608893-611712 (Clockwise)
Preceding gene: 157960326
Following gene: 157960328
Centisome position: 11.77
GC content: 48.87
Gene sequence:
>2820_bases ATGGCCCAGTTTGATAAGTATGTTTCTATCGTTGTCGATCCTCGCTCTCCTGAGAGTATTAGCAGTGCATTAGCTGAGTA TCGTCAGCACATAGAGAAGGGTTCGGCGTTTCGCTTAACCATGAACCTGTTGCTCAATGTGCAGTTTGTTAAGTCTGGTG GGGTTGCACTGACTATCGAAGATGCTGGCGATAACCGCACTTTGGTAGAGCAGGCCATTAATGCCTGTCGCGATGAACAG AAGTTAAGCTATATCAGCGAACCTGTGCTGTTTGGCGCTGCATTGAACTTCCCTGAGTTGATGCCTGCGGTGGTTGAAAC TGTCGAAGCCTTGGTGGCGTTCTCTCGTAGCCGCAACGATTCTAACGATCTCTGGATAGATGACTGCAATGCCTTTGGTA TCGAAGCTCTGTATATGCTGATAGAAAGCGATGCTTCTTATAGCCCAATGCTTGCTCGCTTCCTTGTGCCTTACTGGGAT ACCCAGACCATGACCGCACCGCTGTGCTTGCTTAGCAATTTAGTTAGCAAGCATGGCTGGAGCCGTGATTTGATCAAGGC TTATGTCTGGTGTGATGGGGCTGAGGTGCGCCGTTATTTTTTTGAAGGAGAGGATTATGATGCGCGACAGCCAGACTTGT TAGCGCATTTCGAGTCTCATCCTGACGATTACAGTTACTTTAAAAGTGAGCTACTAGCACGACTGCAAACTAGCCCCATA TTGGTGTTTGCTGACGAATCGAACTCTTTGACTCAGATGTTGTTTGAGTACTACGGCACCATGGGCGCTTGGCCTGTGGG ATGTGAGCGCTGGGATCTGCAAGAGCAGGTAGAATCCTCACAAGAAGAGTGGCAAGACAGGGTAAAGCAGCAGCTTATTT GCGGCGCTAAAGTTGAAGACGAAATCATCGCCTTAGCGGCAATACTCACTGAAACTCACAACGAATCAGACTTTTTTGCT TTGGCAGAAGCTCAGTTAAATGGACTTGATAACGTTTATCAAGCTTGGATGGAGCCAGCTGAAGTTGAAGCTGAGCAAGA ATCCGAGGAGGAGAGTGACGTCGAGTCAGAGCCTGAAGTTGAACCTAGACACTGGGATGAAAAAGCCGGCCGCTCCTTCT TCAGCTGTCTCAATCCAAGACTCGAACTGTTGACTCAAAACCGCCTTGAACGCCTGAGTGATGAGCTTGGTTATCGCGAT GGTCAAGAGATTGTAGAAGCCTTGCCTTATATGCCTGTGCATCTAGGAGGGAGTGCCTATCTTGCACAGCGTCTGCTCCA GCAGCCAAGTTTTGCGGAGCGTGATGCGATTGAGCAATGGCTTGAGCAACACTTGAGTAAGCTGCTCACTGATTTTGTCC TCAAGTATTGCGATGTAGCAGAAGCTGATACTGAAGCACTGCGCCAGTGGCTGACGTATGTTGAAAAGCCAGGTGTCGAG GTGGAGGTTACTCAACAGAGCGACGCAAAAATGATCGAGCTAGTGCGTGCTGGCATGGCAAAAGATGGAGGTAAGTCTGG GCCTGATATTAGCGCGAAACAGGCGGCTTATTGGACCTTGTTTAGCTATGATGGTGGTCAACGCTACATGTTAACCAGCT TGTTATTACAAAGTGCGAGTAAGTTAAATCAGTCTGCAGAAACAAATCAGTTTGAGCCATCGAGTCAGATTGTGCAGCTG GCTAAAAGGCATTGGCAACTCTGGCTATCGATTGCGCCTCAACGTGTGATAAATCGCATCGTTAAATTTAAGGCCGATTA CCCACTTTATGCGGCGATTAATGACCAAGATGCTGAGACTGCTTTATTCGATCTGTTACAGCAACACGGCGTATCTGACG CCACGCTGGAAGCCTTCACATTGATGACAGATCAGCAGGTGGCCGATTACCGCCCTGCGGACTCAAGGTTTGCCCGCCGC TACGCTGACAAAGTTGCGCAATATGCAGCATTAGATAGTGCTGATACCAGCATGATAGGGCGTCAGCAACTTAAGCAATT TGAGACGCTATTACGAGAGCTTGAGTATTGCCGTGAAGATCAGGTTTTGGAGTTTTTCCAGCATCTTAAGGCGGTGAATC CAAGTATTGCATTGCCGATAATGCCGATGTTTGAAGTGGCTCTACTCAATACCTTAAAAGAAGATTTTGAGGACGATACT GCGCAAGCTGTGCATGACAAACTGATGGCTTACCTTGCCAGCGGTGAAGGCTTAGAGGCCTTGAGTCCACAGGCGCTGAA ACTAGCAAAACTCCAAGGCTGGAATCCCTATCCAATGTATCGAGGTAAGCTTGGTCCTGCTGACTTTATCTGGTTGCTAC CAAATGAAATGGCAGAGCGTCTGGCACTGTTTTTAGCGCAGTTAGGTAAGCGTGGCTTGCATTGGTTGGGGCGAAGCTCG GTAGAAAATGCCTATGTGGCAAGCCAGATCCAAAGTGGTGACATAGCAATGGCGGAGCGTTGGAGCCACCCTGAGGTGGG TAATGAGCGTCACCGAGACAGTGATATTGGCGATGCGCTCGATGTGGCTAAACAGAGCTGGGCACTAAATTGGCTCGATA GAGCCGGCGTACCAGCATCATCTTTGGTGTATTTTGCTGTGCATGAGGGCTACGAGCAGCAAGCATTTGTATGCAGGTTA GCGGCGGAAAATCGCTTGCCGGATATGCAGGACTGGCTAACGTCGAATGAGCGGGTGCAACTACTTGAAATGCTGCAAGG TGAAGAGTCACTGTCTGAGGCCTGCACCCAGAGTTTTTTACAGGACTGCTCCAGCGCAGTGAAGCAACTGGCTGGTAAGT TGTTTGGTAACAGAGCTTAA
Upstream 100 bases:
>100_bases TATCCTATTACTTCGATTCGCATTTTCCTGTTCTGCACAGTACTCTTCTCTCCCGCTATCTATTTGTTTTCTTATTTGAT TCCACCGCCAAGGATGCCAT
Downstream 100 bases:
>100_bases CGACTGACACTGCAAGGTGGCTTTATTGCGATAAAGTAGCGATAAAGTCACCCACCCGTAATCCCTTTAATAACCTAAAC CTCAGCTGTAACTTGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 939; Mature: 938
Protein sequence:
>939_residues MAQFDKYVSIVVDPRSPESISSALAEYRQHIEKGSAFRLTMNLLLNVQFVKSGGVALTIEDAGDNRTLVEQAINACRDEQ KLSYISEPVLFGAALNFPELMPAVVETVEALVAFSRSRNDSNDLWIDDCNAFGIEALYMLIESDASYSPMLARFLVPYWD TQTMTAPLCLLSNLVSKHGWSRDLIKAYVWCDGAEVRRYFFEGEDYDARQPDLLAHFESHPDDYSYFKSELLARLQTSPI LVFADESNSLTQMLFEYYGTMGAWPVGCERWDLQEQVESSQEEWQDRVKQQLICGAKVEDEIIALAAILTETHNESDFFA LAEAQLNGLDNVYQAWMEPAEVEAEQESEEESDVESEPEVEPRHWDEKAGRSFFSCLNPRLELLTQNRLERLSDELGYRD GQEIVEALPYMPVHLGGSAYLAQRLLQQPSFAERDAIEQWLEQHLSKLLTDFVLKYCDVAEADTEALRQWLTYVEKPGVE VEVTQQSDAKMIELVRAGMAKDGGKSGPDISAKQAAYWTLFSYDGGQRYMLTSLLLQSASKLNQSAETNQFEPSSQIVQL AKRHWQLWLSIAPQRVINRIVKFKADYPLYAAINDQDAETALFDLLQQHGVSDATLEAFTLMTDQQVADYRPADSRFARR YADKVAQYAALDSADTSMIGRQQLKQFETLLRELEYCREDQVLEFFQHLKAVNPSIALPIMPMFEVALLNTLKEDFEDDT AQAVHDKLMAYLASGEGLEALSPQALKLAKLQGWNPYPMYRGKLGPADFIWLLPNEMAERLALFLAQLGKRGLHWLGRSS VENAYVASQIQSGDIAMAERWSHPEVGNERHRDSDIGDALDVAKQSWALNWLDRAGVPASSLVYFAVHEGYEQQAFVCRL AAENRLPDMQDWLTSNERVQLLEMLQGEESLSEACTQSFLQDCSSAVKQLAGKLFGNRA
Sequences:
>Translated_939_residues MAQFDKYVSIVVDPRSPESISSALAEYRQHIEKGSAFRLTMNLLLNVQFVKSGGVALTIEDAGDNRTLVEQAINACRDEQ KLSYISEPVLFGAALNFPELMPAVVETVEALVAFSRSRNDSNDLWIDDCNAFGIEALYMLIESDASYSPMLARFLVPYWD TQTMTAPLCLLSNLVSKHGWSRDLIKAYVWCDGAEVRRYFFEGEDYDARQPDLLAHFESHPDDYSYFKSELLARLQTSPI LVFADESNSLTQMLFEYYGTMGAWPVGCERWDLQEQVESSQEEWQDRVKQQLICGAKVEDEIIALAAILTETHNESDFFA LAEAQLNGLDNVYQAWMEPAEVEAEQESEEESDVESEPEVEPRHWDEKAGRSFFSCLNPRLELLTQNRLERLSDELGYRD GQEIVEALPYMPVHLGGSAYLAQRLLQQPSFAERDAIEQWLEQHLSKLLTDFVLKYCDVAEADTEALRQWLTYVEKPGVE VEVTQQSDAKMIELVRAGMAKDGGKSGPDISAKQAAYWTLFSYDGGQRYMLTSLLLQSASKLNQSAETNQFEPSSQIVQL AKRHWQLWLSIAPQRVINRIVKFKADYPLYAAINDQDAETALFDLLQQHGVSDATLEAFTLMTDQQVADYRPADSRFARR YADKVAQYAALDSADTSMIGRQQLKQFETLLRELEYCREDQVLEFFQHLKAVNPSIALPIMPMFEVALLNTLKEDFEDDT AQAVHDKLMAYLASGEGLEALSPQALKLAKLQGWNPYPMYRGKLGPADFIWLLPNEMAERLALFLAQLGKRGLHWLGRSS VENAYVASQIQSGDIAMAERWSHPEVGNERHRDSDIGDALDVAKQSWALNWLDRAGVPASSLVYFAVHEGYEQQAFVCRL AAENRLPDMQDWLTSNERVQLLEMLQGEESLSEACTQSFLQDCSSAVKQLAGKLFGNRA >Mature_938_residues AQFDKYVSIVVDPRSPESISSALAEYRQHIEKGSAFRLTMNLLLNVQFVKSGGVALTIEDAGDNRTLVEQAINACRDEQK LSYISEPVLFGAALNFPELMPAVVETVEALVAFSRSRNDSNDLWIDDCNAFGIEALYMLIESDASYSPMLARFLVPYWDT QTMTAPLCLLSNLVSKHGWSRDLIKAYVWCDGAEVRRYFFEGEDYDARQPDLLAHFESHPDDYSYFKSELLARLQTSPIL VFADESNSLTQMLFEYYGTMGAWPVGCERWDLQEQVESSQEEWQDRVKQQLICGAKVEDEIIALAAILTETHNESDFFAL AEAQLNGLDNVYQAWMEPAEVEAEQESEEESDVESEPEVEPRHWDEKAGRSFFSCLNPRLELLTQNRLERLSDELGYRDG QEIVEALPYMPVHLGGSAYLAQRLLQQPSFAERDAIEQWLEQHLSKLLTDFVLKYCDVAEADTEALRQWLTYVEKPGVEV EVTQQSDAKMIELVRAGMAKDGGKSGPDISAKQAAYWTLFSYDGGQRYMLTSLLLQSASKLNQSAETNQFEPSSQIVQLA KRHWQLWLSIAPQRVINRIVKFKADYPLYAAINDQDAETALFDLLQQHGVSDATLEAFTLMTDQQVADYRPADSRFARRY ADKVAQYAALDSADTSMIGRQQLKQFETLLRELEYCREDQVLEFFQHLKAVNPSIALPIMPMFEVALLNTLKEDFEDDTA QAVHDKLMAYLASGEGLEALSPQALKLAKLQGWNPYPMYRGKLGPADFIWLLPNEMAERLALFLAQLGKRGLHWLGRSSV ENAYVASQIQSGDIAMAERWSHPEVGNERHRDSDIGDALDVAKQSWALNWLDRAGVPASSLVYFAVHEGYEQQAFVCRLA AENRLPDMQDWLTSNERVQLLEMLQGEESLSEACTQSFLQDCSSAVKQLAGKLFGNRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106265; Mature: 106134
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFDKYVSIVVDPRSPESISSALAEYRQHIEKGSAFRLTMNLLLNVQFVKSGGVALTIE CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHEEEEEECCCEEEEEE DAGDNRTLVEQAINACRDEQKLSYISEPVLFGAALNFPELMPAVVETVEALVAFSRSRND CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC SNDLWIDDCNAFGIEALYMLIESDASYSPMLARFLVPYWDTQTMTAPLCLLSNLVSKHGW CCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC SRDLIKAYVWCDGAEVRRYFFEGEDYDARQPDLLAHFESHPDDYSYFKSELLARLQTSPI CHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCE LVFADESNSLTQMLFEYYGTMGAWPVGCERWDLQEQVESSQEEWQDRVKQQLICGAKVED EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH EIIALAAILTETHNESDFFALAEAQLNGLDNVYQAWMEPAEVEAEQESEEESDVESEPEV HHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHCCCHHHCCHHHCCCCCCCC EPRHWDEKAGRSFFSCLNPRLELLTQNRLERLSDELGYRDGQEIVEALPYMPVHLGGSAY CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEECCHHH LAQRLLQQPSFAERDAIEQWLEQHLSKLLTDFVLKYCDVAEADTEALRQWLTYVEKPGVE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE VEVTQQSDAKMIELVRAGMAKDGGKSGPDISAKQAAYWTLFSYDGGQRYMLTSLLLQSAS EEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHH KLNQSAETNQFEPSSQIVQLAKRHWQLWLSIAPQRVINRIVKFKADYPLYAAINDQDAET HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCHHH ALFDLLQQHGVSDATLEAFTLMTDQQVADYRPADSRFARRYADKVAQYAALDSADTSMIG HHHHHHHHCCCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH RQQLKQFETLLRELEYCREDQVLEFFQHLKAVNPSIALPIMPMFEVALLNTLKEDFEDDT HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH AQAVHDKLMAYLASGEGLEALSPQALKLAKLQGWNPYPMYRGKLGPADFIWLLPNEMAER HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHH LALFLAQLGKRGLHWLGRSSVENAYVASQIQSGDIAMAERWSHPEVGNERHRDSDIGDAL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHH DVAKQSWALNWLDRAGVPASSLVYFAVHEGYEQQAFVCRLAAENRLPDMQDWLTSNERVQ HHHHHHHHHHHHHHCCCCHHHHEEEHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHH LLEMLQGEESLSEACTQSFLQDCSSAVKQLAGKLFGNRA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AQFDKYVSIVVDPRSPESISSALAEYRQHIEKGSAFRLTMNLLLNVQFVKSGGVALTIE CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHEEEEEECCCEEEEEE DAGDNRTLVEQAINACRDEQKLSYISEPVLFGAALNFPELMPAVVETVEALVAFSRSRND CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC SNDLWIDDCNAFGIEALYMLIESDASYSPMLARFLVPYWDTQTMTAPLCLLSNLVSKHGW CCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC SRDLIKAYVWCDGAEVRRYFFEGEDYDARQPDLLAHFESHPDDYSYFKSELLARLQTSPI CHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCE LVFADESNSLTQMLFEYYGTMGAWPVGCERWDLQEQVESSQEEWQDRVKQQLICGAKVED EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH EIIALAAILTETHNESDFFALAEAQLNGLDNVYQAWMEPAEVEAEQESEEESDVESEPEV HHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHCCCHHHCCHHHCCCCCCCC EPRHWDEKAGRSFFSCLNPRLELLTQNRLERLSDELGYRDGQEIVEALPYMPVHLGGSAY CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEECCHHH LAQRLLQQPSFAERDAIEQWLEQHLSKLLTDFVLKYCDVAEADTEALRQWLTYVEKPGVE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE VEVTQQSDAKMIELVRAGMAKDGGKSGPDISAKQAAYWTLFSYDGGQRYMLTSLLLQSAS EEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHH KLNQSAETNQFEPSSQIVQLAKRHWQLWLSIAPQRVINRIVKFKADYPLYAAINDQDAET HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCHHH ALFDLLQQHGVSDATLEAFTLMTDQQVADYRPADSRFARRYADKVAQYAALDSADTSMIG HHHHHHHHCCCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH RQQLKQFETLLRELEYCREDQVLEFFQHLKAVNPSIALPIMPMFEVALLNTLKEDFEDDT HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH AQAVHDKLMAYLASGEGLEALSPQALKLAKLQGWNPYPMYRGKLGPADFIWLLPNEMAER HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHH LALFLAQLGKRGLHWLGRSSVENAYVASQIQSGDIAMAERWSHPEVGNERHRDSDIGDAL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHH DVAKQSWALNWLDRAGVPASSLVYFAVHEGYEQQAFVCRLAAENRLPDMQDWLTSNERVQ HHHHHHHHHHHHHHCCCCHHHHEEEHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHH LLEMLQGEESLSEACTQSFLQDCSSAVKQLAGKLFGNRA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA