| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960325
Identifier: 157960325
GI number: 157960325
Start: 606457
End: 607014
Strand: Direct
Name: 157960325
Synonym: Spea_0496
Alternate gene names: NA
Gene position: 606457-607014 (Clockwise)
Preceding gene: 157960324
Following gene: 157960326
Centisome position: 11.72
GC content: 38.71
Gene sequence:
>558_bases ATGATTAACCAAGAATATTACGTTTGGACTGAAGACTGTCAGTTTGGCTTACTCGATGCGGCCAATGAGTTTACAGAAAC GGTTCAAAATAAAAGAGAGTTGCTGTCAGTAGATGAGGCTTTAGCGTACAAGATGACGACTCAAGGTGACAGTGAAGGGT TCGCGGATGTGTACTGCTCACCTAAGTATCTGCTGAGTGAAAAACTGTACGCTTTACTGCGTCCATTTGACTTAGAGTAT GTGCAATTTATTCCTGCAAATATTGACCAGAAAGCTGAAAAATTTTACCTGTTAAAAGTCATCAATTTCATTTCACTCAT TGATGAGAAAAAATCAAAAGTGACCATAAAAAGGGGCAACATAAAAAATGTTGATAGGTTTTTATTATCAAGCGAGCTGG CTAATATCAATCTAACAGATAGATTGATATTTAAAGTTGGTCATAGCCCGGTAACTGTGGTGCACAAATCAATAGTCGAT TCCTTAAACACGCAGAATCTCCAAGGCGTGCATTTTATTCCTGTTACTGCTTGGAGTGCTTGGTTGGCGACCAAATAG
Upstream 100 bases:
>100_bases GCTCACGACTTTGAGCAGGCGTAGCCTGATGCATTACCAATGTGGGGCGAAGCGCCACGACTTTAGTTGTTAGACGAAGT CTAACTGGAAGAAATAATTA
Downstream 100 bases:
>100_bases CTTAATGATAGACACCTATGTTAAATGCCTATGTTAAATGGTAGAGAACATAAACATTTTTAGCTCTTAAAGTATCAGCC GTAGGCTGATTTATTGTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MINQEYYVWTEDCQFGLLDAANEFTETVQNKRELLSVDEALAYKMTTQGDSEGFADVYCSPKYLLSEKLYALLRPFDLEY VQFIPANIDQKAEKFYLLKVINFISLIDEKKSKVTIKRGNIKNVDRFLLSSELANINLTDRLIFKVGHSPVTVVHKSIVD SLNTQNLQGVHFIPVTAWSAWLATK
Sequences:
>Translated_185_residues MINQEYYVWTEDCQFGLLDAANEFTETVQNKRELLSVDEALAYKMTTQGDSEGFADVYCSPKYLLSEKLYALLRPFDLEY VQFIPANIDQKAEKFYLLKVINFISLIDEKKSKVTIKRGNIKNVDRFLLSSELANINLTDRLIFKVGHSPVTVVHKSIVD SLNTQNLQGVHFIPVTAWSAWLATK >Mature_185_residues MINQEYYVWTEDCQFGLLDAANEFTETVQNKRELLSVDEALAYKMTTQGDSEGFADVYCSPKYLLSEKLYALLRPFDLEY VQFIPANIDQKAEKFYLLKVINFISLIDEKKSKVTIKRGNIKNVDRFLLSSELANINLTDRLIFKVGHSPVTVVHKSIVD SLNTQNLQGVHFIPVTAWSAWLATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21206; Mature: 21206
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINQEYYVWTEDCQFGLLDAANEFTETVQNKRELLSVDEALAYKMTTQGDSEGFADVYCS CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECC PKYLLSEKLYALLRPFDLEYVQFIPANIDQKAEKFYLLKVINFISLIDEKKSKVTIKRGN CHHHHHHHHHHHHCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC IKNVDRFLLSSELANINLTDRLIFKVGHSPVTVVHKSIVDSLNTQNLQGVHFIPVTAWSA CCHHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHH WLATK HHCCC >Mature Secondary Structure MINQEYYVWTEDCQFGLLDAANEFTETVQNKRELLSVDEALAYKMTTQGDSEGFADVYCS CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECC PKYLLSEKLYALLRPFDLEYVQFIPANIDQKAEKFYLLKVINFISLIDEKKSKVTIKRGN CHHHHHHHHHHHHCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC IKNVDRFLLSSELANINLTDRLIFKVGHSPVTVVHKSIVDSLNTQNLQGVHFIPVTAWSA CCHHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHH WLATK HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA