| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960309
Identifier: 157960309
GI number: 157960309
Start: 592148
End: 592576
Strand: Direct
Name: 157960309
Synonym: Spea_0480
Alternate gene names: NA
Gene position: 592148-592576 (Clockwise)
Preceding gene: 157960308
Following gene: 157960310
Centisome position: 11.44
GC content: 43.36
Gene sequence:
>429_bases ATGAATAGAGTACTGGGAAGTGTCGTTTTCACCGTCTTGTTATCAATGCTATCGGCGGGCAGTTATGCCGGTGGCGGTCA GGAGATGGCCCCTGCTAAATATTATGATGAACCGCTTAATACGATCACCATGATAGAAGCAGAAACCTTAGTGGGCAAAG AGGGAGTTTACTTCTTCGACGTCAATACATTGGAGTTATGGGCAGAAGGATTCATTCCAGGCGCTGTTTATTTCAACGTA AAAAATTGGAAAGACTTACTGCCAAAAAACAAAGACGCACAGTTGGTTCTCTACTGTGCAAACCGTCTTTGTAATGCCAG TGAAATTGCTGCTCGACACGTGATGAAATTGGGTTATACCAATGTTCGTCAAATGCCAGATGGAATTTACGGCTGGCGTT TATCGAATCGAGTAACAGAAAAGCCATAA
Upstream 100 bases:
>100_bases CATTCTAGACGGTGTTGGTTACAGCGCTAAAAAGATGTAATTGAGTTAATACCGACCTCAACCTAGGTGCGCTTAGGTTG AGGTAACTAAGAGAGAAACT
Downstream 100 bases:
>100_bases CGGATTATGTTTATTTATTTTTAGTGAGATTGATTGTATGAAAAAGCTTAAAAAAAGTGTCTTGGCCGTTGTGTCTTGTC TAACCCTATCAGTATCAGCG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Cytochrome C Family Protein; Rhodanese-Like Protein
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNRVLGSVVFTVLLSMLSAGSYAGGGQEMAPAKYYDEPLNTITMIEAETLVGKEGVYFFDVNTLELWAEGFIPGAVYFNV KNWKDLLPKNKDAQLVLYCANRLCNASEIAARHVMKLGYTNVRQMPDGIYGWRLSNRVTEKP
Sequences:
>Translated_142_residues MNRVLGSVVFTVLLSMLSAGSYAGGGQEMAPAKYYDEPLNTITMIEAETLVGKEGVYFFDVNTLELWAEGFIPGAVYFNV KNWKDLLPKNKDAQLVLYCANRLCNASEIAARHVMKLGYTNVRQMPDGIYGWRLSNRVTEKP >Mature_142_residues MNRVLGSVVFTVLLSMLSAGSYAGGGQEMAPAKYYDEPLNTITMIEAETLVGKEGVYFFDVNTLELWAEGFIPGAVYFNV KNWKDLLPKNKDAQLVLYCANRLCNASEIAARHVMKLGYTNVRQMPDGIYGWRLSNRVTEKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15877; Mature: 15877
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVLGSVVFTVLLSMLSAGSYAGGGQEMAPAKYYDEPLNTITMIEAETLVGKEGVYFFD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEEHHHHCCCCCEEEEE VNTLELWAEGFIPGAVYFNVKNWKDLLPKNKDAQLVLYCANRLCNASEIAARHVMKLGYT CCHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCC NVRQMPDGIYGWRLSNRVTEKP HHHHCCCCCCCEECCCCCCCCC >Mature Secondary Structure MNRVLGSVVFTVLLSMLSAGSYAGGGQEMAPAKYYDEPLNTITMIEAETLVGKEGVYFFD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEEHHHHCCCCCEEEEE VNTLELWAEGFIPGAVYFNVKNWKDLLPKNKDAQLVLYCANRLCNASEIAARHVMKLGYT CCHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCC NVRQMPDGIYGWRLSNRVTEKP HHHHCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA