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The map label for this gene is ybbK [C]

Identifier: 157960292

GI number: 157960292

Start: 571090

End: 572019

Strand: Direct

Name: ybbK [C]

Synonym: Spea_0463

Alternate gene names: 157960292

Gene position: 571090-572019 (Clockwise)

Preceding gene: 157960291

Following gene: 157960293

Centisome position: 11.04

GC content: 48.49

Gene sequence:

>930_bases
ATGTTCGCATTTACACTCTTTGTTTTATTTGTCTTTTTTATCCTCTATAAATTGTTGCTCATTGTGCCTATGCGCGAGGT
CAACGTGATTGAGCGCTTAGGTAAGTTTCGCACAGTGCTACAGCCCGGTTTTCACTTTCTGATCCCGTTTTTCGATCGGG
TCGCCTATAAGCATGAGATCCGTGAGCAGGTACTCGATGTGCCACCACAAAGCTGTATCTCAAAAGATAACACTCAGCTA
GAGGTCGATGGTTTAGTTTACCTCAAGGTGATGGACGGTAAGCTTGCCAGTTATGGTATTGAAGACTATCGACGCGCGGC
GGTAAACCTAGCGCAAACTACCATGCGTTCAGAGATAGGTAAATTAAGCCTAAGTCAGACATTTTCGGAGCGAGACAGCC
TGAATGAGTCGATAGTACGAGAGATCGATAAGGCATCGGATCCTTGGGGGATCAAGGTGTTGCGTTACGAGATCAAGAAC
ATCACGCCCTCACGTAAAGTCATTCACACCCTAGAGAAGCAGATGGAAGCGGAGCGAAGCAAGCGCGCCGAGATCACCCT
AGCGAATGCAGAAAAGGCGGCGATGATTAATTTGTCTGAAGGTGAGCGCCAAGAAGCGATTAATCTATCGGAAGGTGAGA
AACAGCGCCGTATTAACGAGGCTAAGGGTACGGCACAAGAGATTGCTATCATCGCCCGGGCTAAGGCTGAAGGCATGGAG
CTTGTTTCTGCCGCGCTTGCCAAAGAGGGCGGCCATGAAGCGATGAATATGCAGCTTAAAGAGCAGTTTATTACTCAGGT
TGGCAAGATATTGGCTGAGGCCGATGTGTCAGTGGTGCCGGCTGAATTGGCTAAAATTGAAGGATTCTTTGAAGGCATGG
AGCAGGTTACTCACGCTGTGTCTGCCAACTCAGTGAAGGGAGCACGCTAA

Upstream 100 bases:

>100_bases
ATCTGCAGAGATAATATTGCGTTAGTGGTTGAGCCTATTAAGGCTGAAGACGAGCACTACGTCGAAAAGTAATTAGTTAA
CGTCAGGAAGGAATCTCTCT

Downstream 100 bases:

>100_bases
TGATGATTTCTGGAATTGATACCGATCTAATTGTAATGGGCATTTGGGGCCTTATCTTTGCTATTTTCGTGGTTAAGCTG
TTTCAATCGATTCGATTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEIREQVLDVPPQSCISKDNTQL
EVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIGKLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKN
ITPSRKVIHTLEKQMEAERSKRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIIARAKAEGME
LVSAALAKEGGHEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTHAVSANSVKGAR

Sequences:

>Translated_309_residues
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEIREQVLDVPPQSCISKDNTQL
EVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIGKLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKN
ITPSRKVIHTLEKQMEAERSKRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIIARAKAEGME
LVSAALAKEGGHEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTHAVSANSVKGAR
>Mature_309_residues
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEIREQVLDVPPQSCISKDNTQL
EVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIGKLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKN
ITPSRKVIHTLEKQMEAERSKRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIIARAKAEGME
LVSAALAKEGGHEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTHAVSANSVKGAR

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=290, Percent_Identity=40.6896551724138, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI38016911, Length=166, Percent_Identity=36.7469879518072, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI221316744, Length=165, Percent_Identity=32.7272727272727, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI21686995, Length=165, Percent_Identity=32.7272727272727, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI7657615, Length=183, Percent_Identity=28.4153005464481, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI20149563, Length=280, Percent_Identity=25.7142857142857, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1786697, Length=306, Percent_Identity=33.9869281045752, Blast_Score=185, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI32564147, Length=266, Percent_Identity=42.1052631578947, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17569499, Length=159, Percent_Identity=35.2201257861635, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI71987612, Length=162, Percent_Identity=32.7160493827161, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI25153583, Length=162, Percent_Identity=32.7160493827161, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71987621, Length=162, Percent_Identity=32.7160493827161, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17569493, Length=196, Percent_Identity=29.5918367346939, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193209764, Length=218, Percent_Identity=29.3577981651376, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17570459, Length=220, Percent_Identity=30.4545454545455, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71989948, Length=165, Percent_Identity=31.5151515151515, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71989955, Length=165, Percent_Identity=31.5151515151515, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32566490, Length=149, Percent_Identity=32.8859060402685, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI193210507, Length=162, Percent_Identity=30.2469135802469, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17570161, Length=162, Percent_Identity=30.2469135802469, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17569497, Length=189, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45550506, Length=287, Percent_Identity=39.7212543554007, Blast_Score=216, Evalue=1e-56,
Organism=Drosophila melanogaster, GI45556022, Length=152, Percent_Identity=35.5263157894737, Blast_Score=101, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24657857, Length=165, Percent_Identity=32.7272727272727, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI281365664, Length=162, Percent_Identity=32.7160493827161, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI62484448, Length=162, Percent_Identity=32.7160493827161, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI62484274, Length=162, Percent_Identity=32.7160493827161, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI18860517, Length=167, Percent_Identity=31.1377245508982, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI21356845, Length=198, Percent_Identity=29.7979797979798, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281361631, Length=201, Percent_Identity=27.8606965174129, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281361633, Length=201, Percent_Identity=27.8606965174129, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28573263, Length=203, Percent_Identity=30.0492610837438, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34735; Mature: 34735

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEI
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
REQVLDVPPQSCISKDNTQLEVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIG
HHHHHCCCCHHHCCCCCCEEEECCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHH
KLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKNITPSRKVIHTLEKQMEAERS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIIARAKAEGME
HCCEEEEECCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVSAALAKEGGHEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTHAV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SANSVKGAR
HCCCCCCCC
>Mature Secondary Structure
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEI
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
REQVLDVPPQSCISKDNTQLEVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIG
HHHHHCCCCHHHCCCCCCEEEECCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHH
KLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKNITPSRKVIHTLEKQMEAERS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIIARAKAEGME
HCCEEEEECCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVSAALAKEGGHEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTHAV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SANSVKGAR
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]