| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is purH [H]
Identifier: 157960261
GI number: 157960261
Start: 537651
End: 539240
Strand: Reverse
Name: purH [H]
Synonym: Spea_0432
Alternate gene names: 157960261
Gene position: 539240-537651 (Counterclockwise)
Preceding gene: 157960276
Following gene: 157960260
Centisome position: 10.42
GC content: 48.36
Gene sequence:
>1590_bases ATGAATAATGCCAGACCTATTCGTCGCGCGCTGTTAAGCGTTTCAGATAAAACCGGAATCCTAGAGTTTGCACAAGCGCT GCATGCTCAAGGTGTTGAGCTACTTTCTACTGGTGGCACCGCACGCCTGCTGGCTGATAATGGCGTGCCTGTCATTGAAG TATCAGATTATACTGGTCACCCAGAGATCATGGATGGCCGCGTTAAAACCCTGCACCCTAAAGTGCATGGCGGTATTTTA GCGCGTCGCGGTATCGACGAAATCGTAATGGAACAAAACAACATCAAGCCTATCGACTTGGTTGCAGTTAACTTGTATCC GTTTGCTGCTACCGTTGCTCAAGAAGGTTGCACGCTTGCTGACGCTATCGAGAACATCGATATCGGCGGCCCTACTATGG TGCGATCTACCGCTAAAAACCATAAAGACACTACTATCATCGTTAACGCGAAAGATTACGGCCGCGTTATTGCAGAAATG CAATCAAACGAAGCTAGCACTACCCTTGAGACTCGCTTTGATCTAGCGATTGCAGCGTTTGAGCACACTGCCGCATACGA TGGCATGATTGCTAACTACTTCGGCACTAAAGTACCTGCACACAGCAATGACGAGTGCCATGAAGATTCTAAGTTCCCAC GCACTTACAACACTCAGCTAGTTAAGAAGCAAGACTTGCGCTATGGCGAAAATAGCCACCAAACAGCCGCTTTCTATGTT GATACAAATCTTGATGAAGCCTCTGTTGCCACCGCCGTTCAACTGCAAGGTAAGGCACTGTCATACAATAACATCGCCGA TACCGACTCTGCACTTGAGTGCGTAAAAGAGTTCGACGAGCCAGCTTGTGTGATTGTTAAGCATGCTAATCCATGTGGTG TGGCTATTGGTGAAAACCTACTTGAAGCTTATAACCGTGCATTCCAAACTGACCCAACGTCGGCTTTCGGTGGCATCATC GCCTTTAACGGCGAGCTAGATGCAGCAACTGCTAGCGCGATTGTTGAGCGCCAGTTTGTTGAGGTGATCATAGCCCCTAA AGTTAGCCAAGCAGCCCGTGACGTTATTGCTGCTAAAGCAAACGTACGCTTGCTTGAGTGTGGTGAGTGGGCAGCAAAAA CCACCAGCCTAGATTACAAGCGTGTAAACGGCGGCCTATTACTACAAGATCGCGACCAAGGCATGGTTGGTCTTGATGAC GTTAAGGTTGTTTCTAAGCGCCAACCAACGGCTGAAGAGATGAAAGATCTAATGTTCTGCTGGAAAGTGGCTAAGTTTGT TAAATCAAACGCCATTGTTTACGCCAAGAACAGCATGACAATCGGTGTAGGTGCAGGCCAAATGAGCCGAGTTTACAGCG CTAAGGTTGCAGGTATTAAAGCCGCAGACGAAGGCCTAGAAGTACAAAACTCAGTAATGGCATCAGATGCGTTCTTCCCA TTCCGTGATGGTATCGATGCTGCAGCAGAAGCAGGCATTAGCTGTATCATCCAGCCTGGCGGCTCTATCCGCGATGAAGA GATCATCGCAGCAGCTGATGAGCACGGCATGGCAATGGTATTTACCGGTATGCGTCACTTCCGTCATTAA
Upstream 100 bases:
>100_bases GAGGGACTTTTGGAAAGCAGTGTAGGCCGCTATAGAGCGAGCAATACTGTTCTGTTTTCCGAAAGATCCTTAAAAATAAC TACTGGACCCTGTACCTACA
Downstream 100 bases:
>100_bases TTGGTTTGCGCGAATTAAGCAATAAAGGACTTTATTCGCGCATTAACAAAATTGATATTTAACGTTTAGAGCAAGCTATT CTTTCTAGGTCAAAGAAAGC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MNNARPIRRALLSVSDKTGILEFAQALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHGGIL ARRGIDEIVMEQNNIKPIDLVAVNLYPFAATVAQEGCTLADAIENIDIGGPTMVRSTAKNHKDTTIIVNAKDYGRVIAEM QSNEASTTLETRFDLAIAAFEHTAAYDGMIANYFGTKVPAHSNDECHEDSKFPRTYNTQLVKKQDLRYGENSHQTAAFYV DTNLDEASVATAVQLQGKALSYNNIADTDSALECVKEFDEPACVIVKHANPCGVAIGENLLEAYNRAFQTDPTSAFGGII AFNGELDAATASAIVERQFVEVIIAPKVSQAARDVIAAKANVRLLECGEWAAKTTSLDYKRVNGGLLLQDRDQGMVGLDD VKVVSKRQPTAEEMKDLMFCWKVAKFVKSNAIVYAKNSMTIGVGAGQMSRVYSAKVAGIKAADEGLEVQNSVMASDAFFP FRDGIDAAAEAGISCIIQPGGSIRDEEIIAAADEHGMAMVFTGMRHFRH
Sequences:
>Translated_529_residues MNNARPIRRALLSVSDKTGILEFAQALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHGGIL ARRGIDEIVMEQNNIKPIDLVAVNLYPFAATVAQEGCTLADAIENIDIGGPTMVRSTAKNHKDTTIIVNAKDYGRVIAEM QSNEASTTLETRFDLAIAAFEHTAAYDGMIANYFGTKVPAHSNDECHEDSKFPRTYNTQLVKKQDLRYGENSHQTAAFYV DTNLDEASVATAVQLQGKALSYNNIADTDSALECVKEFDEPACVIVKHANPCGVAIGENLLEAYNRAFQTDPTSAFGGII AFNGELDAATASAIVERQFVEVIIAPKVSQAARDVIAAKANVRLLECGEWAAKTTSLDYKRVNGGLLLQDRDQGMVGLDD VKVVSKRQPTAEEMKDLMFCWKVAKFVKSNAIVYAKNSMTIGVGAGQMSRVYSAKVAGIKAADEGLEVQNSVMASDAFFP FRDGIDAAAEAGISCIIQPGGSIRDEEIIAAADEHGMAMVFTGMRHFRH >Mature_529_residues MNNARPIRRALLSVSDKTGILEFAQALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHGGIL ARRGIDEIVMEQNNIKPIDLVAVNLYPFAATVAQEGCTLADAIENIDIGGPTMVRSTAKNHKDTTIIVNAKDYGRVIAEM QSNEASTTLETRFDLAIAAFEHTAAYDGMIANYFGTKVPAHSNDECHEDSKFPRTYNTQLVKKQDLRYGENSHQTAAFYV DTNLDEASVATAVQLQGKALSYNNIADTDSALECVKEFDEPACVIVKHANPCGVAIGENLLEAYNRAFQTDPTSAFGGII AFNGELDAATASAIVERQFVEVIIAPKVSQAARDVIAAKANVRLLECGEWAAKTTSLDYKRVNGGLLLQDRDQGMVGLDD VKVVSKRQPTAEEMKDLMFCWKVAKFVKSNAIVYAKNSMTIGVGAGQMSRVYSAKVAGIKAADEGLEVQNSVMASDAFFP FRDGIDAAAEAGISCIIQPGGSIRDEEIIAAADEHGMAMVFTGMRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=518, Percent_Identity=37.0656370656371, Blast_Score=273, Evalue=3e-73, Organism=Escherichia coli, GI1790439, Length=529, Percent_Identity=73.7240075614367, Blast_Score=835, Evalue=0.0, Organism=Caenorhabditis elegans, GI71985564, Length=514, Percent_Identity=33.0739299610895, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71985574, Length=344, Percent_Identity=26.453488372093, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71985556, Length=130, Percent_Identity=36.1538461538462, Blast_Score=81, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323768, Length=492, Percent_Identity=35.7723577235772, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6323056, Length=500, Percent_Identity=34.2, Blast_Score=245, Evalue=1e-65, Organism=Drosophila melanogaster, GI24649832, Length=612, Percent_Identity=33.9869281045752, Blast_Score=294, Evalue=9e-80,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 57106; Mature: 57106
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNARPIRRALLSVSDKTGILEFAQALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGH CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCEEEECCCCCC PEIMDGRVKTLHPKVHGGILARRGIDEIVMEQNNIKPIDLVAVNLYPFAATVAQEGCTLA CCCCCCCEEEECCHHHCCHHHHCCHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHCCCCHH DAIENIDIGGPTMVRSTAKNHKDTTIIVNAKDYGRVIAEMQSNEASTTLETRFDLAIAAF HHHHCCCCCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHEEEEEEH EHTAAYDGMIANYFGTKVPAHSNDECHEDSKFPRTYNTQLVKKQDLRYGENSHQTAAFYV HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEE DTNLDEASVATAVQLQGKALSYNNIADTDSALECVKEFDEPACVIVKHANPCGVAIGENL ECCCCHHHHHEEEEECCCEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH LEAYNRAFQTDPTSAFGGIIAFNGELDAATASAIVERQFVEVIIAPKVSQAARDVIAAKA HHHHHHHHCCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHC NVRLLECGEWAAKTTSLDYKRVNGGLLLQDRDQGMVGLDDVKVVSKRQPTAEEMKDLMFC CEEEEECCCCHHHCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHH WKVAKFVKSNAIVYAKNSMTIGVGAGQMSRVYSAKVAGIKAADEGLEVQNSVMASDAFFP HHHHHHHHCCEEEEEECCEEEEECCCHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCC FRDGIDAAAEAGISCIIQPGGSIRDEEIIAAADEHGMAMVFTGMRHFRH CCCCCCHHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEEEEHHHHHCC >Mature Secondary Structure MNNARPIRRALLSVSDKTGILEFAQALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGH CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCEEEECCCCCC PEIMDGRVKTLHPKVHGGILARRGIDEIVMEQNNIKPIDLVAVNLYPFAATVAQEGCTLA CCCCCCCEEEECCHHHCCHHHHCCHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHCCCCHH DAIENIDIGGPTMVRSTAKNHKDTTIIVNAKDYGRVIAEMQSNEASTTLETRFDLAIAAF HHHHCCCCCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHEEEEEEH EHTAAYDGMIANYFGTKVPAHSNDECHEDSKFPRTYNTQLVKKQDLRYGENSHQTAAFYV HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEE DTNLDEASVATAVQLQGKALSYNNIADTDSALECVKEFDEPACVIVKHANPCGVAIGENL ECCCCHHHHHEEEEECCCEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH LEAYNRAFQTDPTSAFGGIIAFNGELDAATASAIVERQFVEVIIAPKVSQAARDVIAAKA HHHHHHHHCCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHC NVRLLECGEWAAKTTSLDYKRVNGGLLLQDRDQGMVGLDDVKVVSKRQPTAEEMKDLMFC CEEEEECCCCHHHCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHH WKVAKFVKSNAIVYAKNSMTIGVGAGQMSRVYSAKVAGIKAADEGLEVQNSVMASDAFFP HHHHHHHHCCEEEEEECCEEEEECCCHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCC FRDGIDAAAEAGISCIIQPGGSIRDEEIIAAADEHGMAMVFTGMRHFRH CCCCCCHHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA