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The map label for this gene is ylbK [H]

Identifier: 157960252

GI number: 157960252

Start: 522943

End: 525159

Strand: Direct

Name: ylbK [H]

Synonym: Spea_0423

Alternate gene names: 157960252

Gene position: 522943-525159 (Clockwise)

Preceding gene: 157960251

Following gene: 157960254

Centisome position: 10.11

GC content: 45.69

Gene sequence:

>2217_bases
ATGATTAATAGAATTATTATTCTTTGTCTAGCACTGGCTAGTTCGCAAGTTTCGTTCGCAGAAGAGCGGCCTAAAATCGG
CTTAGTCTTGAGTGGTGGCGGTGCCAAAGGTGCGGCCCATATCGGCGTGCTTAAGGTGCTGGAAGAGAAAAACATCCCCA
TCGACTATATTGCTGGAACCAGTATCGGTGCCTATGTGGGCGGCATGTACGCATTAGGCTATAGTGCGGCAGAGATTGAA
GCCATCATGATGAAGACCGATTGGAGTAAAGGTTATTCAGACACCATCCCTAGGGAGTCATTAAGCTACCGAGACAAAGA
GACCCGCGATCAGTTTAATATTCCGATAAATATTGGCTATAGCGACGAGCAAGTTAAAACGCCAGCTGGCTTGTTACGCG
GGCAAACTATGTCGCAGCTGCTACGTAGTTCAACGGATTTGGTGCATCAGTTCGGTGATTTTGATGATCTTTCTATTCCA
TATCGAGCTGTAGCAACAGACTTAGTGACCAGTGAACCTGTGGTGCTGAGTTCAGGTAGTGTGGTTGCTGCAATGCAGGC
CTCAGCGTCAGTGCCTGGCGCCCTGCAACCGGCAGTTATCGATGGCAAGTTGCTGGTGGACGGCGGGATTGCCAACAATA
TGCCTGTCGATGTAGTTAAGGCGATGGGGGCCGACATTGTTATCGCGGTCGATATCGGTTCCCCCTTGGTGAGTAAAGAT
GAGCTTAATAGCACTATAGCGGTGTTGAATCAATTATCTACAATTCTTACCAATGCTAGCTCCGAGAGGCAGAAAGCCCT
ACTCAGTGATCATGATATCTTGATCCGTCCTAACATTGGCGAGTTAAGCACCACAGATTTTAGCATTATGCCTATCGCGT
TGCCGCTAGGAGAAATTGCGGCACGAGAGCAGAGCGATAAACTTGAGCAATACAGTGATGGTAGCGAAGATTACAAACAG
TATTTGGCTCACAAAAGAAATAAGAGTAAGCAATGGCTAGCAGAGATAGATAGGCCGTTGATCAAAGTGATTTACAACAA
TGACTCAAAGGTTAGTGAGAAATTATTAGCGGACAATCTTGATCTGGATGTTGGTGACCATGTCACAGTCGAAGACTTAG
AGGCTGGCCTAGATAGAATTTATGCATTGGATAAGTTTGAACGTGTCGATGCAGAGTTTACCGATACCGATGAGGGACGA
GTATTAACCGTTACTACCAAGGCTAAGTCCTGGGGGCCGAATTACTTTCAGCTGGGCTTTAGTTGGGAAGATGATTTTAG
CCTAGACTCTGTCATCTCTCTCGATATGGCTTATACCATGACTGAGCTTACCGAGAATGGGGGAGAGTGGCGTAATGAGT
TGTCACTCGGTTTTGATAAACTATTAGCATCTGAGTTTTATCAGCCGTTAGCAAAAGATCAGTCCTATTTCAGCCGTGCT
AGGGTCGAGTATGAACTTAAAGATTGGAGCTTCTTTGAAAATAATAACCGGGTGTTAGAGCTGAAACAAACGGCATACCG
TACCGAAGTCGGTATCGGTGCTAACTACACCCAAAACGGCATGGTCGAAATCGGTATGCTGGGGGAAAGAGGCGATCTTG
AGAACGATGTTTGGGGATTGGGCAAGGTGGATTACACCGGTTATGGAGGCTACTTCAAGTTTGCCTATGATGACCTAAAT
AGCATCAACTTCCCGACTTCGGGTAATCGATTTACCTTTAATGTGTATATGAGAAAAGAGAGTTATGATTTAGATGGTGT
CGGAGATACTTCTGATTTCTCAATGCAGTATGAAGCCGATTGGCGCGGAGCCGTTGGTGTGGGTAATCATGCCTTTGTGG
GTATAGCCTCGCTGGCAACCGTTGATAAAGACGGCGCGTTTACCGTTAACGTCTCTGAGCTTGGTGGATTCTTAAATCTT
TCTGGTTATCATAAAAATGCGCTTTATGGTTCCCATAAAATATTTGGTGCCTTTGTCTATCAGTATGACTTAGGTCGTGA
TGTACTGGGAATGACCGAATATCCGCTCTATTTAGGCACCAGTATTGAGGCGGGTAATGTGTGGAATCAAAAAGACAATG
TGTCACTCGATGACTTAATCTATGCGGGAAGCTTGTACTTAGGTATTGATACCAGCGTTGGCCCCGCAGCGTTTGGTTTT
GGTGCATCCGACGATGGTGAGAAAACCGTATTCCTGTTTATTGGTAAGAACTGGTAG

Upstream 100 bases:

>100_bases
AGGCTTAGCCTCAAAGTAGACTATTGACCGCGCTATTTCTTGCGCATCGTCACTAAATAAAATACGTTAAGACATTAGTA
GAAGAGTTAAATAAGTCATT

Downstream 100 bases:

>100_bases
AGCTTAGGTGAGTGCGGTTATGTAATGCTGATGCTTTGACCAAAGAGCCGATTAGACAAAAGCCCATCGATTGATGGGCT
TTTTGCTTTTATGGTCGTAA

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 738; Mature: 738

Protein sequence:

>738_residues
MINRIIILCLALASSQVSFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKNIPIDYIAGTSIGAYVGGMYALGYSAAEIE
AIMMKTDWSKGYSDTIPRESLSYRDKETRDQFNIPINIGYSDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIP
YRAVATDLVTSEPVVLSSGSVVAAMQASASVPGALQPAVIDGKLLVDGGIANNMPVDVVKAMGADIVIAVDIGSPLVSKD
ELNSTIAVLNQLSTILTNASSERQKALLSDHDILIRPNIGELSTTDFSIMPIALPLGEIAAREQSDKLEQYSDGSEDYKQ
YLAHKRNKSKQWLAEIDRPLIKVIYNNDSKVSEKLLADNLDLDVGDHVTVEDLEAGLDRIYALDKFERVDAEFTDTDEGR
VLTVTTKAKSWGPNYFQLGFSWEDDFSLDSVISLDMAYTMTELTENGGEWRNELSLGFDKLLASEFYQPLAKDQSYFSRA
RVEYELKDWSFFENNNRVLELKQTAYRTEVGIGANYTQNGMVEIGMLGERGDLENDVWGLGKVDYTGYGGYFKFAYDDLN
SINFPTSGNRFTFNVYMRKESYDLDGVGDTSDFSMQYEADWRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNL
SGYHKNALYGSHKIFGAFVYQYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDNVSLDDLIYAGSLYLGIDTSVGPAAFGF
GASDDGEKTVFLFIGKNW

Sequences:

>Translated_738_residues
MINRIIILCLALASSQVSFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKNIPIDYIAGTSIGAYVGGMYALGYSAAEIE
AIMMKTDWSKGYSDTIPRESLSYRDKETRDQFNIPINIGYSDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIP
YRAVATDLVTSEPVVLSSGSVVAAMQASASVPGALQPAVIDGKLLVDGGIANNMPVDVVKAMGADIVIAVDIGSPLVSKD
ELNSTIAVLNQLSTILTNASSERQKALLSDHDILIRPNIGELSTTDFSIMPIALPLGEIAAREQSDKLEQYSDGSEDYKQ
YLAHKRNKSKQWLAEIDRPLIKVIYNNDSKVSEKLLADNLDLDVGDHVTVEDLEAGLDRIYALDKFERVDAEFTDTDEGR
VLTVTTKAKSWGPNYFQLGFSWEDDFSLDSVISLDMAYTMTELTENGGEWRNELSLGFDKLLASEFYQPLAKDQSYFSRA
RVEYELKDWSFFENNNRVLELKQTAYRTEVGIGANYTQNGMVEIGMLGERGDLENDVWGLGKVDYTGYGGYFKFAYDDLN
SINFPTSGNRFTFNVYMRKESYDLDGVGDTSDFSMQYEADWRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNL
SGYHKNALYGSHKIFGAFVYQYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDNVSLDDLIYAGSLYLGIDTSVGPAAFGF
GASDDGEKTVFLFIGKNW
>Mature_738_residues
MINRIIILCLALASSQVSFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKNIPIDYIAGTSIGAYVGGMYALGYSAAEIE
AIMMKTDWSKGYSDTIPRESLSYRDKETRDQFNIPINIGYSDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIP
YRAVATDLVTSEPVVLSSGSVVAAMQASASVPGALQPAVIDGKLLVDGGIANNMPVDVVKAMGADIVIAVDIGSPLVSKD
ELNSTIAVLNQLSTILTNASSERQKALLSDHDILIRPNIGELSTTDFSIMPIALPLGEIAAREQSDKLEQYSDGSEDYKQ
YLAHKRNKSKQWLAEIDRPLIKVIYNNDSKVSEKLLADNLDLDVGDHVTVEDLEAGLDRIYALDKFERVDAEFTDTDEGR
VLTVTTKAKSWGPNYFQLGFSWEDDFSLDSVISLDMAYTMTELTENGGEWRNELSLGFDKLLASEFYQPLAKDQSYFSRA
RVEYELKDWSFFENNNRVLELKQTAYRTEVGIGANYTQNGMVEIGMLGERGDLENDVWGLGKVDYTGYGGYFKFAYDDLN
SINFPTSGNRFTFNVYMRKESYDLDGVGDTSDFSMQYEADWRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNL
SGYHKNALYGSHKIFGAFVYQYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDNVSLDDLIYAGSLYLGIDTSVGPAAFGF
GASDDGEKTVFLFIGKNW

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=292, Percent_Identity=34.5890410958904, Blast_Score=123, Evalue=8e-28,
Organism=Homo sapiens, GI148727290, Length=292, Percent_Identity=34.5890410958904, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI260656041, Length=214, Percent_Identity=35.981308411215, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI116256487, Length=214, Percent_Identity=35.981308411215, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI260656039, Length=214, Percent_Identity=35.981308411215, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI260656043, Length=214, Percent_Identity=35.981308411215, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI260656037, Length=214, Percent_Identity=35.981308411215, Blast_Score=120, Evalue=5e-27,
Organism=Escherichia coli, GI226510936, Length=324, Percent_Identity=29.0123456790123, Blast_Score=110, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71997299, Length=330, Percent_Identity=28.1818181818182, Blast_Score=90, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71997289, Length=330, Percent_Identity=28.1818181818182, Blast_Score=90, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6323581, Length=344, Percent_Identity=28.7790697674419, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28571388, Length=214, Percent_Identity=35.0467289719626, Blast_Score=93, Evalue=6e-19,
Organism=Drosophila melanogaster, GI281376913, Length=214, Percent_Identity=34.5794392523364, Blast_Score=90, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 80985; Mature: 80985

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRIIILCLALASSQVSFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKNIPIDYIAGT
CCHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECC
SIGAYVGGMYALGYSAAEIEAIMMKTDWSKGYSDTIPRESLSYRDKETRDQFNIPINIGY
CHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECC
SDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIPYRAVATDLVTSEPVVLSSGS
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCC
VVAAMQASASVPGALQPAVIDGKLLVDGGIANNMPVDVVKAMGADIVIAVDIGSPLVSKD
EEEEEECCCCCCCCCCCEEECCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCHH
ELNSTIAVLNQLSTILTNASSERQKALLSDHDILIRPNIGELSTTDFSIMPIALPLGEIA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECHHHHH
AREQSDKLEQYSDGSEDYKQYLAHKRNKSKQWLAEIDRPLIKVIYNNDSKVSEKLLADNL
HCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCC
DLDVGDHVTVEDLEAGLDRIYALDKFERVDAEFTDTDEGRVLTVTTKAKSWGPNYFQLGF
CCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEE
SWEDDFSLDSVISLDMAYTMTELTENGGEWRNELSLGFDKLLASEFYQPLAKDQSYFSRA
CCCCCCCCHHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RVEYELKDWSFFENNNRVLELKQTAYRTEVGIGANYTQNGMVEIGMLGERGDLENDVWGL
EEEEEECCCEEEECCCEEEEEEHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
GKVDYTGYGGYFKFAYDDLNSINFPTSGNRFTFNVYMRKESYDLDGVGDTSDFSMQYEAD
CCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCC
WRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNLSGYHKNALYGSHKIFGAFVY
CCCCCCCCCCCEEEEHHHEEECCCCCEEEEHHHHCCEEEECCCCCCCCCCCCEEEEEEEE
QYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDNVSLDDLIYAGSLYLGIDTSVGPAAFGF
EEECCCCCCCCCCCCEEEECEECCCCCCCCCCCCCHHHEEEECEEEEEECCCCCCHHCCC
GASDDGEKTVFLFIGKNW
CCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MINRIIILCLALASSQVSFAEERPKIGLVLSGGGAKGAAHIGVLKVLEEKNIPIDYIAGT
CCHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECC
SIGAYVGGMYALGYSAAEIEAIMMKTDWSKGYSDTIPRESLSYRDKETRDQFNIPINIGY
CHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECC
SDEQVKTPAGLLRGQTMSQLLRSSTDLVHQFGDFDDLSIPYRAVATDLVTSEPVVLSSGS
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCC
VVAAMQASASVPGALQPAVIDGKLLVDGGIANNMPVDVVKAMGADIVIAVDIGSPLVSKD
EEEEEECCCCCCCCCCCEEECCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCHH
ELNSTIAVLNQLSTILTNASSERQKALLSDHDILIRPNIGELSTTDFSIMPIALPLGEIA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECHHHHH
AREQSDKLEQYSDGSEDYKQYLAHKRNKSKQWLAEIDRPLIKVIYNNDSKVSEKLLADNL
HCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCC
DLDVGDHVTVEDLEAGLDRIYALDKFERVDAEFTDTDEGRVLTVTTKAKSWGPNYFQLGF
CCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEE
SWEDDFSLDSVISLDMAYTMTELTENGGEWRNELSLGFDKLLASEFYQPLAKDQSYFSRA
CCCCCCCCHHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RVEYELKDWSFFENNNRVLELKQTAYRTEVGIGANYTQNGMVEIGMLGERGDLENDVWGL
EEEEEECCCEEEECCCEEEEEEHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
GKVDYTGYGGYFKFAYDDLNSINFPTSGNRFTFNVYMRKESYDLDGVGDTSDFSMQYEAD
CCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCC
WRGAVGVGNHAFVGIASLATVDKDGAFTVNVSELGGFLNLSGYHKNALYGSHKIFGAFVY
CCCCCCCCCCCEEEEHHHEEECCCCCEEEEHHHHCCEEEECCCCCCCCCCCCEEEEEEEE
QYDLGRDVLGMTEYPLYLGTSIEAGNVWNQKDNVSLDDLIYAGSLYLGIDTSVGPAAFGF
EEECCCCCCCCCCCCEEEECEECCCCCCCCCCCCCHHHEEEECEEEEEECCCCCCHHCCC
GASDDGEKTVFLFIGKNW
CCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]