| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960150
Identifier: 157960150
GI number: 157960150
Start: 359683
End: 360426
Strand: Reverse
Name: 157960150
Synonym: Spea_0321
Alternate gene names: NA
Gene position: 360426-359683 (Counterclockwise)
Preceding gene: 157960151
Following gene: 157960144
Centisome position: 6.97
GC content: 46.37
Gene sequence:
>744_bases ATGATGAAATTAAAAATGATGTTCGGCATAGCCGCACTAACGTCTACTGCCGTATTTGCCCAAGGTCCTCAGTGCGATCA CGCTCAACTGCCATACCAGCAGATGACGCCAGTGCCATATGACAGCACGCCTTACTCACCACAAGACACCATGCCTGAGC AGTGTAGCAACCCTGAAGTTGAAGCATACATCGCAGCTTGGGAAGCGGGTGAAATTGATTTCACGACTATTCAAGCTAAC GACAGCATTGCTAAAGATCAGCAATTTTGTAAGTCACTAGATGACGACGGCAACGTACTAGAAATTCAGGACTGTGATAA GTCAAAGTCGCCAGTTGGTTATATCTGGAAAGAACTATCAGACAGCCCAGTTGTTATCGGTATCACCGACGGCGGTAAAT CAGATCACGCGCCTCACTTCCATGGTCAGCCTGAGTGTTACTACGTGGTAAACGGTGAAGGGCAAACTCTTGCCGATAAC CAGTTCAAGAAGCTAGGTACCGGCCAATACTTCTACATTCCAGGGGCCACAATTCACAACACGCCTATCATGTCTGACAA AGGTCTAGGTGTCATGTACTGGTATCCAAACAACGCTAATTTCAACGGCTTTAAGTACTACTGGCGCAAAGATGTTAAGA ATCTACGCGTAGCTGAAGAAGCATTCGATCGCGTTGATGAGATCCGTAAACGCGACCTAGACTTAGGTCCATACGGCACT AATGAAGCTATCTTCAAAAAGTAA
Upstream 100 bases:
>100_bases AACTTTACGCAGCAATTATCACTTTATTGTTAGTTCAAGCCCGTTAAAACGAGCACAATATCGCAGCTTTGGCTGCATCA GCTAAAAAAACAGGATGAGA
Downstream 100 bases:
>100_bases GCTTATTCGTTAAATAAAAAGGGCTCAAATGAGCCCTTTTTAGCTTTCACTGCTATGCACTGAATTAAAACGCTTCATTG ACGTTGAAATAAAAACCGCT
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MMKLKMMFGIAALTSTAVFAQGPQCDHAQLPYQQMTPVPYDSTPYSPQDTMPEQCSNPEVEAYIAAWEAGEIDFTTIQAN DSIAKDQQFCKSLDDDGNVLEIQDCDKSKSPVGYIWKELSDSPVVIGITDGGKSDHAPHFHGQPECYYVVNGEGQTLADN QFKKLGTGQYFYIPGATIHNTPIMSDKGLGVMYWYPNNANFNGFKYYWRKDVKNLRVAEEAFDRVDEIRKRDLDLGPYGT NEAIFKK
Sequences:
>Translated_247_residues MMKLKMMFGIAALTSTAVFAQGPQCDHAQLPYQQMTPVPYDSTPYSPQDTMPEQCSNPEVEAYIAAWEAGEIDFTTIQAN DSIAKDQQFCKSLDDDGNVLEIQDCDKSKSPVGYIWKELSDSPVVIGITDGGKSDHAPHFHGQPECYYVVNGEGQTLADN QFKKLGTGQYFYIPGATIHNTPIMSDKGLGVMYWYPNNANFNGFKYYWRKDVKNLRVAEEAFDRVDEIRKRDLDLGPYGT NEAIFKK >Mature_247_residues MMKLKMMFGIAALTSTAVFAQGPQCDHAQLPYQQMTPVPYDSTPYSPQDTMPEQCSNPEVEAYIAAWEAGEIDFTTIQAN DSIAKDQQFCKSLDDDGNVLEIQDCDKSKSPVGYIWKELSDSPVVIGITDGGKSDHAPHFHGQPECYYVVNGEGQTLADN QFKKLGTGQYFYIPGATIHNTPIMSDKGLGVMYWYPNNANFNGFKYYWRKDVKNLRVAEEAFDRVDEIRKRDLDLGPYGT NEAIFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27771; Mature: 27771
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKLKMMFGIAALTSTAVFAQGPQCDHAQLPYQQMTPVPYDSTPYSPQDTMPEQCSNPEV CEEEHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCE EAYIAAWEAGEIDFTTIQANDSIAKDQQFCKSLDDDGNVLEIQDCDKSKSPVGYIWKELS EEEEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCC DSPVVIGITDGGKSDHAPHFHGQPECYYVVNGEGQTLADNQFKKLGTGQYFYIPGATIHN CCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEECCCHHHHHCCCCEEEECCCEEEC TPIMSDKGLGVMYWYPNNANFNGFKYYWRKDVKNLRVAEEAFDRVDEIRKRDLDLGPYGT CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NEAIFKK CCCCCCC >Mature Secondary Structure MMKLKMMFGIAALTSTAVFAQGPQCDHAQLPYQQMTPVPYDSTPYSPQDTMPEQCSNPEV CEEEHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCE EAYIAAWEAGEIDFTTIQANDSIAKDQQFCKSLDDDGNVLEIQDCDKSKSPVGYIWKELS EEEEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCC DSPVVIGITDGGKSDHAPHFHGQPECYYVVNGEGQTLADNQFKKLGTGQYFYIPGATIHN CCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEECCCHHHHHCCCCEEEECCCEEEC TPIMSDKGLGVMYWYPNNANFNGFKYYWRKDVKNLRVAEEAFDRVDEIRKRDLDLGPYGT CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NEAIFKK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA