| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960145
Identifier: 157960145
GI number: 157960145
Start: 353631
End: 354974
Strand: Direct
Name: 157960145
Synonym: Spea_0316
Alternate gene names: NA
Gene position: 353631-354974 (Clockwise)
Preceding gene: 157960143
Following gene: 157960146
Centisome position: 6.83
GC content: 47.69
Gene sequence:
>1344_bases ATGGAATTGGTCTTTGTTCATGGATGGAGTGTAACCCATACAGACACTTATGCTCAGCTGCCACAGGCTTTAGTTAAGCT GCTGGGAGATGAGTTAAATCTGACTATCCGTCATATTCACCTCGGCCGATATATCAGCTTCGATGATGCGGTTCGCCTGA GTGATATCGCCAAAGCCTTTAATGATGCACATCTTGAGCTACTCGGTAAAAAACCATTTGCGGTGATCACCCACTCTACT GGTGCAGCGGTTATTCGTCATTGGCTGCAAACCTTTTTTACTGGCGATAAGCTTTCCCGTTGTCCACTAACCCACTTGAT CATGCTTGCTCCAGCTAATCACGGCTCGGCCTTAGCCCAGCTAGGAAAGTCACGAGTGGGCCGCATCAAGAGCTTTTTTG CCGGGGTAGAGCCCGGACAGGGGATCTTGGATTGGCTAGAGCTCGGCAGTGATGGTCAATATGATTTGAATCGATATTGG CTGGACAATTTCAGCCTCGATGGTCCCTTGCCATTCGTGCTAACGGGTGAGGCTATCGACAGTCAGTTTTATGATTACCT GAATAGCTATACCGCTGAAGCTGGCTCAGATGGGGTGGTACGGGTAGCGTCGGCGAACCTTAACTTTTCATACCTGTTGT TAGCCGAAACTGCGCACACTTGCGATGGCTTCGATAAACGCTGTATCTCAACGCTCAAGTTGAGCAAACATTCCCAGCCG CATCAACAAACCGCCTTCGAAGTGATAAAAAATGCCAGCCACAGTGGCAGCAGTAAAGGCATTATGGGCTCAGTCACTAA CCGTAACGCAAAAAATAAACCTGTGGTACAGCGTATCGCTCAATGTTTGAGGGTGACTAGCCCTAAACAATATCGGCAGC TTTCTGATGAAATGAGTCAAGCAAGCTCAATTAAGCGTAAACCTAGGGCTTGCATGTTGGTAGTGAGAGTGACCGATGAT ACCGGGCTGCCAGTAGAGGATTTCGATATATTGTTACTCTCTGGCCCTCACTTCGTTCCCGGTGAGTTTAAGAAAGGTTT TATGCTCGACAAGCAGAAAAATCATACCAATAAGCATGTGCTGACCTTCTACTTTGATGCCGATAAGCTCGCTAAGGTGA GCGAGGGTAAAATCGGCATCCGGGTCGAGCCTAGGCCGAATAGTGGCATGTGTTATTACCTTAGCGCTGAATTTCGCTCC GATGTCGAACAGGTTCATGAGTTACTGATAGCTGACCAAACCACCATGGTGGACATTGTTTTACAGCGGCGGATTAAGCC AGAGACTTTTAGCTTTATAGCGCCTAAAGATGGCGGCGACTTCTCATACTTAATCGATGAGTAA
Upstream 100 bases:
>100_bases TGATAAGCTATTGAAAATTATTAATTAGATAATTTGTACTATATAAATAAGTCGAACAGGCTTGTCATCTAATGGCAAGT TATTCGTCGTCGAGGTCACA
Downstream 100 bases:
>100_bases GTCGATGATCAAGCGCTGCTTGGCTAAATATTTTTGGAAAGTTTTCTTGAACAGGCTTTCTGATTAGTTTTTAGTTGGTT ATCAAGTTATGATCTATTTT
Product: phospholipase
Products: NA
Alternate protein names: PlaB Phospholipase
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAFNDAHLELLGKKPFAVITHST GAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQLGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYW LDNFSLDGPLPFVLTGEAIDSQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQASSIKRKPRACMLVVRVTDD TGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHVLTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRS DVEQVHELLIADQTTMVDIVLQRRIKPETFSFIAPKDGGDFSYLIDE
Sequences:
>Translated_447_residues MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAFNDAHLELLGKKPFAVITHST GAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQLGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYW LDNFSLDGPLPFVLTGEAIDSQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQASSIKRKPRACMLVVRVTDD TGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHVLTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRS DVEQVHELLIADQTTMVDIVLQRRIKPETFSFIAPKDGGDFSYLIDE >Mature_447_residues MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAFNDAHLELLGKKPFAVITHST GAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQLGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYW LDNFSLDGPLPFVLTGEAIDSQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQASSIKRKPRACMLVVRVTDD TGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHVLTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRS DVEQVHELLIADQTTMVDIVLQRRIKPETFSFIAPKDGGDFSYLIDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49867; Mature: 49867
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAF CEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCEECCCCCHHHHHHHHHH NDAHLELLGKKPFAVITHSTGAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQ CCHHHEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHH LGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYWLDNFSLDGPLPFVLTGEAID HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECHHHH SQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP HHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCHHCCCHHHHHHHHHHHHCCCCC HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQ HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH ASSIKRKPRACMLVVRVTDDTGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHV HHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE LTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRSDVEQVHELLIADQTTMVDIV EEEEECCHHHHHCCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHH LQRRIKPETFSFIAPKDGGDFSYLIDE HHHCCCCCCEEEEECCCCCCEEEEECC >Mature Secondary Structure MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAF CEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCEECCCCCHHHHHHHHHH NDAHLELLGKKPFAVITHSTGAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQ CCHHHEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHH LGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYWLDNFSLDGPLPFVLTGEAID HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECHHHH SQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP HHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCHHCCCHHHHHHHHHHHHCCCCC HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQ HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH ASSIKRKPRACMLVVRVTDDTGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHV HHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE LTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRSDVEQVHELLIADQTTMVDIV EEEEECCHHHHHCCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHH LQRRIKPETFSFIAPKDGGDFSYLIDE HHHCCCCCCEEEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA