| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960144
Identifier: 157960144
GI number: 157960144
Start: 352769
End: 353389
Strand: Reverse
Name: 157960144
Synonym: Spea_0315
Alternate gene names: NA
Gene position: 353389-352769 (Counterclockwise)
Preceding gene: 157960150
Following gene: 157960142
Centisome position: 6.83
GC content: 45.41
Gene sequence:
>621_bases ATGAAAACTAAATCACTTATCTTAGCATCTGTAATGGCAACGGCAATCTCGGCACCAACTATGGCTGCAGACTGGTTCAT TGGTGGCGGTGTTGGCGCACAGCAAAACACTTACAAAGGCTCTTATGACCCTGTATTACAAAACCCAATTGAGGGTGGCT CTCAAACTCAGCACCTAAAAGAAACCGAAAATAACGTCATCTATGAAGTCAGAGCCGGTGTTTACTTAAACGATGCTAAC CGTGTCTACGGTACTTACTCTTACAACTCAGATGACTTGAGCCGTCAGCAAAGCTTCTTAATGTCTTATGATTACTTAGT CGGCCTAGGTGACAGCAACAAACTAAATTGGTTTATCGGTGCGACTGCGGGTATGAACCACATCAGTCCAGATGCCAGCA CTCTAGACTCAAAAAACCGCTTCGTCTGGGGTGGTCAAACGGGTCTAATGTATAAGATTAACGACAAGGTTAGCACCGAA ATCGGTTACCGCTACCTTAAGCAAGATTACGATGTAAGTGGCCCAACGCCGACTCCATACAGCGGTGCAGTTGCTGGGTC TGAAACCGCATCACTAAATGACAGCCAACAGCTTTACCTATCTGTTGACTACCGTTTCTAA
Upstream 100 bases:
>100_bases CGATCGTTAATATCATTCAGTTATTATTCAGCTAGTTCCCCCTATGATGTGTCCAACAAAACGCAACACCTAAACAATTT ATCTAGTGTGGGAGCACAAC
Downstream 100 bases:
>100_bases GCGCTGCGGCCTCTAAAAGAGCCGCTTGTAAGAAAAACGCTTAAAACAATAAAGCCGCCAACTACCTGAGTTAGTTGGCG GCTTTATGCTATGCAGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKTKSLILASVMATAISAPTMAADWFIGGGVGAQQNTYKGSYDPVLQNPIEGGSQTQHLKETENNVIYEVRAGVYLNDAN RVYGTYSYNSDDLSRQQSFLMSYDYLVGLGDSNKLNWFIGATAGMNHISPDASTLDSKNRFVWGGQTGLMYKINDKVSTE IGYRYLKQDYDVSGPTPTPYSGAVAGSETASLNDSQQLYLSVDYRF
Sequences:
>Translated_206_residues MKTKSLILASVMATAISAPTMAADWFIGGGVGAQQNTYKGSYDPVLQNPIEGGSQTQHLKETENNVIYEVRAGVYLNDAN RVYGTYSYNSDDLSRQQSFLMSYDYLVGLGDSNKLNWFIGATAGMNHISPDASTLDSKNRFVWGGQTGLMYKINDKVSTE IGYRYLKQDYDVSGPTPTPYSGAVAGSETASLNDSQQLYLSVDYRF >Mature_206_residues MKTKSLILASVMATAISAPTMAADWFIGGGVGAQQNTYKGSYDPVLQNPIEGGSQTQHLKETENNVIYEVRAGVYLNDAN RVYGTYSYNSDDLSRQQSFLMSYDYLVGLGDSNKLNWFIGATAGMNHISPDASTLDSKNRFVWGGQTGLMYKINDKVSTE IGYRYLKQDYDVSGPTPTPYSGAVAGSETASLNDSQQLYLSVDYRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22603; Mature: 22603
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKSLILASVMATAISAPTMAADWFIGGGVGAQQNTYKGSYDPVLQNPIEGGSQTQHLK CCCHHHHHHHHHHHHHCCCCEEECEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHH ETENNVIYEVRAGVYLNDANRVYGTYSYNSDDLSRQQSFLMSYDYLVGLGDSNKLNWFIG HCCCCEEEEEECCEEECCCCEEEEEECCCCHHHHHHHHHHHEEEEEEECCCCCCEEEEEE ATAGMNHISPDASTLDSKNRFVWGGQTGLMYKINDKVSTEIGYRYLKQDYDVSGPTPTPY CCCCCCCCCCCCHHCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC SGAVAGSETASLNDSQQLYLSVDYRF CCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MKTKSLILASVMATAISAPTMAADWFIGGGVGAQQNTYKGSYDPVLQNPIEGGSQTQHLK CCCHHHHHHHHHHHHHCCCCEEECEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHH ETENNVIYEVRAGVYLNDANRVYGTYSYNSDDLSRQQSFLMSYDYLVGLGDSNKLNWFIG HCCCCEEEEEECCEEECCCCEEEEEECCCCHHHHHHHHHHHEEEEEEECCCCCCEEEEEE ATAGMNHISPDASTLDSKNRFVWGGQTGLMYKINDKVSTEIGYRYLKQDYDVSGPTPTPY CCCCCCCCCCCCHHCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC SGAVAGSETASLNDSQQLYLSVDYRF CCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA