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The map label for this gene is rdoA [H]

Identifier: 157960139

GI number: 157960139

Start: 348616

End: 349644

Strand: Direct

Name: rdoA [H]

Synonym: Spea_0310

Alternate gene names: 157960139

Gene position: 348616-349644 (Clockwise)

Preceding gene: 157960138

Following gene: 157960140

Centisome position: 6.74

GC content: 48.59

Gene sequence:

>1029_bases
ATGAATATCGAACCATCTAAGGCGGCAATGGAGCAAGGCTCTGGCTCGGCTTTTCACTATCAAGCCTTGACGCCTGACCT
TATTTTAACCGCCATCGAAACACTCGGGATCTATCCTGAAACCGGGCTGTTAGCTCTCAATAGCTATGAGAATCGGGTTT
ATCAGTTCCGTTGTGATAGAGGTCAGCGCTATGTGGTTAAGTTTTACCGCCCTGAGCGCTGGAGCAATGAGCAGATCCAA
GAGGAGCATGACTTCTCTGCCGCCCTTGCCGAGCAAGAGGTGCCAATTGCCACGCCAGTGATTATCGATGGTAAGTCGCT
GCATGAATATCAAGGCTTTAGATTTGCGCTGTTTCCATCCATTGGAGGGCGCGCCTTTGAGGTCGATAACCTCGACCAGT
TAGAGCAGGTGGGGCGCTTTATCGGTCGTATTCATCAATACTCAAAGCAGGCTGATTTTAAATACCGAGATGTGATGTCG
CCTAAATTACTGGGTGAAGAGTCGCTTAGTTGGCTTAAATCATCAGGGCATATTCCAGCGAGCCTAGAGCTGCCTTACTT
TACAATAGTGGAGCAGATCTTGGAAAAGGCCTCGTCGCTGTGGCTACCCGATAGCTATCGCTCAATCAGGCTTCATGGCG
ACTTACACCCTAGTAATATCTTATGGACGCCAGATGGTCCAGGCTTTGTCGATCTAGACGACGCCAAGATGGGGCCTGCG
GTGCAGGATATATGGATGATGCTAGCTGGAGATAGGCCGCAGCAGCTTTTACAACTTGAGGTATTGCTAGAAGGCTATGA
AGAGTTCTGTGAGTTCGATAGTCACGAACTTAAGTTAATAGAACCGCTTAGAGCGATGCGTATGTTGCACTACAATGCAT
GGTTAAGCCGCCGCTGGGGCGATCCTGCCTTTCCAATGAACTTCCCTTGGTTTGCCGAGGATAAATATTGGGAACAGCAG
ATTTTAGCGTTTAAAGAGCAGCTAGCAGTTCTGGATGAAGCGCCTTTGAGTCTAATTCCTCAGTACTAA

Upstream 100 bases:

>100_bases
TATACCAATTAGTATTCGCGGCAGTAAAAAGTGCTAAATAAGCATGAATATATTTACAATTTGAAGGTCAATCTAGGCCT
CCACCATTGAGCATAATCAA

Downstream 100 bases:

>100_bases
AACTGCTGAAGACACTTATTTTGTAACAGAAAAATGAACTTTTGCGCTTGAGGTCGACTCGAAAGCACATTATGTTATGT
CCAAATTATTAGCGTGATGC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MNIEPSKAAMEQGSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDRGQRYVVKFYRPERWSNEQIQ
EEHDFSAALAEQEVPIATPVIIDGKSLHEYQGFRFALFPSIGGRAFEVDNLDQLEQVGRFIGRIHQYSKQADFKYRDVMS
PKLLGEESLSWLKSSGHIPASLELPYFTIVEQILEKASSLWLPDSYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
VQDIWMMLAGDRPQQLLQLEVLLEGYEEFCEFDSHELKLIEPLRAMRMLHYNAWLSRRWGDPAFPMNFPWFAEDKYWEQQ
ILAFKEQLAVLDEAPLSLIPQY

Sequences:

>Translated_342_residues
MNIEPSKAAMEQGSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDRGQRYVVKFYRPERWSNEQIQ
EEHDFSAALAEQEVPIATPVIIDGKSLHEYQGFRFALFPSIGGRAFEVDNLDQLEQVGRFIGRIHQYSKQADFKYRDVMS
PKLLGEESLSWLKSSGHIPASLELPYFTIVEQILEKASSLWLPDSYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
VQDIWMMLAGDRPQQLLQLEVLLEGYEEFCEFDSHELKLIEPLRAMRMLHYNAWLSRRWGDPAFPMNFPWFAEDKYWEQQ
ILAFKEQLAVLDEAPLSLIPQY
>Mature_342_residues
MNIEPSKAAMEQGSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDRGQRYVVKFYRPERWSNEQIQ
EEHDFSAALAEQEVPIATPVIIDGKSLHEYQGFRFALFPSIGGRAFEVDNLDQLEQVGRFIGRIHQYSKQADFKYRDVMS
PKLLGEESLSWLKSSGHIPASLELPYFTIVEQILEKASSLWLPDSYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
VQDIWMMLAGDRPQQLLQLEVLLEGYEEFCEFDSHELKLIEPLRAMRMLHYNAWLSRRWGDPAFPMNFPWFAEDKYWEQQ
ILAFKEQLAVLDEAPLSLIPQY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=329, Percent_Identity=50.4559270516717, Blast_Score=347, Evalue=6e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 39497; Mature: 39497

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEPSKAAMEQGSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDR
CCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECC
GQRYVVKFYRPERWSNEQIQEEHDFSAALAEQEVPIATPVIIDGKSLHEYQGFRFALFPS
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCEEEEECC
IGGRAFEVDNLDQLEQVGRFIGRIHQYSKQADFKYRDVMSPKLLGEESLSWLKSSGHIPA
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCHHHHHHHHHCCCCCE
SLELPYFTIVEQILEKASSLWLPDSYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
EECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCEEECCCCCCCHH
VQDIWMMLAGDRPQQLLQLEVLLEGYEEFCEFDSHELKLIEPLRAMRMLHYNAWLSRRWG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DPAFPMNFPWFAEDKYWEQQILAFKEQLAVLDEAPLSLIPQY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure
MNIEPSKAAMEQGSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDR
CCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECC
GQRYVVKFYRPERWSNEQIQEEHDFSAALAEQEVPIATPVIIDGKSLHEYQGFRFALFPS
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCEEEEECC
IGGRAFEVDNLDQLEQVGRFIGRIHQYSKQADFKYRDVMSPKLLGEESLSWLKSSGHIPA
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCHHHHHHHHHCCCCCE
SLELPYFTIVEQILEKASSLWLPDSYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
EECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCEEECCCCCCCHH
VQDIWMMLAGDRPQQLLQLEVLLEGYEEFCEFDSHELKLIEPLRAMRMLHYNAWLSRRWG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DPAFPMNFPWFAEDKYWEQQILAFKEQLAVLDEAPLSLIPQY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]