| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ppc [H]
Identifier: 157960054
GI number: 157960054
Start: 251543
End: 254179
Strand: Reverse
Name: ppc [H]
Synonym: Spea_0225
Alternate gene names: 157960054
Gene position: 254179-251543 (Counterclockwise)
Preceding gene: 157960055
Following gene: 157960053
Centisome position: 4.91
GC content: 46.99
Gene sequence:
>2637_bases ATGGTAGACATGTATGCCTCGCTAAGGTCAAACGTTGGGACCTTAGGGCAAATTTTAGGTGACACAATCCGCACCGATCT CGATGATACTTTCCTGGAAAAAATTGAACAAATCCGTCATCTTGCCAAAAGCTCACGCCAAGGTGATGACGCCTCTCGTG AAGAGATGCTGACTTTGCTTTCCTCTTTAAGCGACGACGAGCTAGTTCCTTTTGCTAAAGCTTTTAACCAGTTTCTAAAC CTTGCCAATATCGCAGAGCAGTTCCATACAATTAGCCGTAATTGCGATGAATTAGTTTGCGTCCCCGATCCGGTAGAACA ACTACTTGGCCGGATGCTAGGCGGCAAAATTGATCAAGAAAAAGTACTCGCTTGCCTTAAGACTCTCGATATCGATCTTG TACTAACAGCCCATCCTACTGAGATCTCTCGTCGTACTCTTATTCAAAAGTACTCGGCGGTAATTGATTCTCTAACCGCT TTAGAGAATACCCAACTGACTGAGCAAGAAAAAAAGCAACACCACTTACGACTACGTCAGCTAATCGCTCAAATTTGGCA TACCAATGAGATCCGTAACGAACGCCCAACCCCTGTAGATGAAGCGCGTTGGGGATTAAGTACAATTGAAGCCTCTCTAT GGCAAGCTATTCCAGATTTTCTTAGACAACTTAATCAGCAAGTCGAAGAGCGCACCAATACCCAGCTTCCTATCGATATA GCACCGGTAAGGTTCTCTAGCTGGATGGGCGGAGACCGTGATGGTAATCCATTTGTCACTTCGACCGTCACGCAAGAGGT GCTTGACCGAAACCGTCATACTGCAGCGCGTTTATACCTAAAAGATGTAGTCTTGCTGGTAAACGAACTCTCAATGGAAG GCGCCAATGAAGAATTATTGGCTTACTGTAATAACAGTAATGAGCCATATCGTGATGTACTTAGAGATCTGCGTAAAAAA CTTAGAGCGACGATCGATTACCTAAATGAAAAGCTTGAAGGGCATCAACCAGACGTTAATCCAAAAGATATTATTTGGCA TGAAAGCGATCTAAAAGATCCGTTAATGATGCTTTATAAGAGTCTATGCGACCAAGGAATGAGCCTAATTGCTAACGGCT TACTGCTTGATATGCTTCGTCGTATTGCCTGTTTTGGTATTCATATGCTGAGACTGGATGTGCGACAAGACGCTCAGCGC CATGCCGATGTGATTGCCGAACTGACTCGCTATTTAGGCATGGGCGATTATGCTCACTGGGATGAAAGCGAAAAGCAGTC ATTCTTACTACGTGAACTTTCAAGTAAGCGTCCGTTAATTCCTGCAAATTGGCAAGCTTCAGCAGAAGTTGAAGAAGTAG TGAAAACTTGCCGATTGGTTGCCAGCCAGCCAGCTCGCGCTATGGGCTCTTATGTTATTTCGATGGCCAGCCAGCCATCA GATGTATTAGCGGTTCTACTCCTGCTGAAAGAAACTGGCTGTCCACACCCAATTCGCGTAGTGCCTTTGTTTGAAACCTT AGATGATTTAAACAATGCATCTAACTGTATGTCGGCATTGTTTGCTATCGATTGGTACCGAGGTTACACCAAAGGTATTC AAGAGGTCATGATTGGCTATTCTGACTCGGCTAAAGATGCAGGTGTAATGGCTGCCGCTTGGGCGCAATACACTGCACAA GAAAAACTAGTCGCCATCAGCCAAGAAGCAAATATCAAACTTACCCTCTTCCATGGTCGTGGCGGCACAATTGGCCGTGG AGGTGGACCAGCTCATCAAGCGATCTTGTCTCAGCCTCCAGGTTCTGTAGATGGTCGCATTCGAGTCACTGAACAAGGTG AAATGATCCGCTTTAAGTTTGGCTTACCGAAACTTGCAGTGCAGAGTCTGGCGCTATACACCTCGGCAGTCATGGAGGCG ACACTATTACCGCCACCAGAGCCTAAGCCAGAATGGCGTCAATGTATGCAGCAGCTTGCAGACGAGTCGGTAGTCGCTTA TCGAGCCATAGTGCGTGAAGAGCCTGACTTCGTGTCTTACTTCCGTGCCGCTACACCGGAAATTGAGCTAGGAAAACTAC CACTAGGTAGTCGCCCGGCAAAACGCCGAGTCGACGGCGGCATTGAGAGCCTTCGCGCCATCCCATGGATCTTCGCTTGG TCACAAAACCGTTTGATGCTTCCCGCATGGTTAGGTGCTGGCGAAGCGCTCAAAGCGGCATCGGAGCGAGGAGACTTAGC TCTGCTACAGGAGATGGAGAAACACTGGCCATTCTTTAAGACCCGCATTTCAATGCTAGAGATGGTTTACGCCAAAGCTG AGCCTAACTTGTCTAAGTTCTATGAAACTAGCTTAGTTCCTTCTGAGCTACATCACCTAGGCGTACAGCTTAGAGAGCGG TTAGCGACTGGAGTAGAAGCCGTACTTGAGCTGACACAGGCAGAAAGCTTGATGGCACATACCCCTTGGAATCGTGAGTC TGTCGAACTTAGAAACCCTTATATTGATCCGCTAAACTTCCTGCAGGCTGAGCTGCTAGCAAGAACACGTAGAGAGGAGC AATCTTCTCAAAATGTTGAGCTGGCATTGATGTTAACCATAGCGGGCGTTGCCGCAGGAATGAGAAATACAGGTTAA
Upstream 100 bases:
>100_bases GGTATAAAGCCTGTTCAAGCACGATATTTTAATCTCGACCATTGCCTAGCGTTACACTGCTAGGTATTGTGATCGATTAG CTTACCGATATGGAGCACGT
Downstream 100 bases:
>100_bases TGAAGCTACTAAAAGTGGCGCTTACTAGCGCCTTGCTGTTATTGACAGGCTGTGTCAGTCAATACAGCATCACTGAAAAA GAGCTAGAAACTTATCTTAA
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MVDMYASLRSNVGTLGQILGDTIRTDLDDTFLEKIEQIRHLAKSSRQGDDASREEMLTLLSSLSDDELVPFAKAFNQFLN LANIAEQFHTISRNCDELVCVPDPVEQLLGRMLGGKIDQEKVLACLKTLDIDLVLTAHPTEISRRTLIQKYSAVIDSLTA LENTQLTEQEKKQHHLRLRQLIAQIWHTNEIRNERPTPVDEARWGLSTIEASLWQAIPDFLRQLNQQVEERTNTQLPIDI APVRFSSWMGGDRDGNPFVTSTVTQEVLDRNRHTAARLYLKDVVLLVNELSMEGANEELLAYCNNSNEPYRDVLRDLRKK LRATIDYLNEKLEGHQPDVNPKDIIWHESDLKDPLMMLYKSLCDQGMSLIANGLLLDMLRRIACFGIHMLRLDVRQDAQR HADVIAELTRYLGMGDYAHWDESEKQSFLLRELSSKRPLIPANWQASAEVEEVVKTCRLVASQPARAMGSYVISMASQPS DVLAVLLLLKETGCPHPIRVVPLFETLDDLNNASNCMSALFAIDWYRGYTKGIQEVMIGYSDSAKDAGVMAAAWAQYTAQ EKLVAISQEANIKLTLFHGRGGTIGRGGGPAHQAILSQPPGSVDGRIRVTEQGEMIRFKFGLPKLAVQSLALYTSAVMEA TLLPPPEPKPEWRQCMQQLADESVVAYRAIVREEPDFVSYFRAATPEIELGKLPLGSRPAKRRVDGGIESLRAIPWIFAW SQNRLMLPAWLGAGEALKAASERGDLALLQEMEKHWPFFKTRISMLEMVYAKAEPNLSKFYETSLVPSELHHLGVQLRER LATGVEAVLELTQAESLMAHTPWNRESVELRNPYIDPLNFLQAELLARTRREEQSSQNVELALMLTIAGVAAGMRNTG
Sequences:
>Translated_878_residues MVDMYASLRSNVGTLGQILGDTIRTDLDDTFLEKIEQIRHLAKSSRQGDDASREEMLTLLSSLSDDELVPFAKAFNQFLN LANIAEQFHTISRNCDELVCVPDPVEQLLGRMLGGKIDQEKVLACLKTLDIDLVLTAHPTEISRRTLIQKYSAVIDSLTA LENTQLTEQEKKQHHLRLRQLIAQIWHTNEIRNERPTPVDEARWGLSTIEASLWQAIPDFLRQLNQQVEERTNTQLPIDI APVRFSSWMGGDRDGNPFVTSTVTQEVLDRNRHTAARLYLKDVVLLVNELSMEGANEELLAYCNNSNEPYRDVLRDLRKK LRATIDYLNEKLEGHQPDVNPKDIIWHESDLKDPLMMLYKSLCDQGMSLIANGLLLDMLRRIACFGIHMLRLDVRQDAQR HADVIAELTRYLGMGDYAHWDESEKQSFLLRELSSKRPLIPANWQASAEVEEVVKTCRLVASQPARAMGSYVISMASQPS DVLAVLLLLKETGCPHPIRVVPLFETLDDLNNASNCMSALFAIDWYRGYTKGIQEVMIGYSDSAKDAGVMAAAWAQYTAQ EKLVAISQEANIKLTLFHGRGGTIGRGGGPAHQAILSQPPGSVDGRIRVTEQGEMIRFKFGLPKLAVQSLALYTSAVMEA TLLPPPEPKPEWRQCMQQLADESVVAYRAIVREEPDFVSYFRAATPEIELGKLPLGSRPAKRRVDGGIESLRAIPWIFAW SQNRLMLPAWLGAGEALKAASERGDLALLQEMEKHWPFFKTRISMLEMVYAKAEPNLSKFYETSLVPSELHHLGVQLRER LATGVEAVLELTQAESLMAHTPWNRESVELRNPYIDPLNFLQAELLARTRREEQSSQNVELALMLTIAGVAAGMRNTG >Mature_878_residues MVDMYASLRSNVGTLGQILGDTIRTDLDDTFLEKIEQIRHLAKSSRQGDDASREEMLTLLSSLSDDELVPFAKAFNQFLN LANIAEQFHTISRNCDELVCVPDPVEQLLGRMLGGKIDQEKVLACLKTLDIDLVLTAHPTEISRRTLIQKYSAVIDSLTA LENTQLTEQEKKQHHLRLRQLIAQIWHTNEIRNERPTPVDEARWGLSTIEASLWQAIPDFLRQLNQQVEERTNTQLPIDI APVRFSSWMGGDRDGNPFVTSTVTQEVLDRNRHTAARLYLKDVVLLVNELSMEGANEELLAYCNNSNEPYRDVLRDLRKK LRATIDYLNEKLEGHQPDVNPKDIIWHESDLKDPLMMLYKSLCDQGMSLIANGLLLDMLRRIACFGIHMLRLDVRQDAQR HADVIAELTRYLGMGDYAHWDESEKQSFLLRELSSKRPLIPANWQASAEVEEVVKTCRLVASQPARAMGSYVISMASQPS DVLAVLLLLKETGCPHPIRVVPLFETLDDLNNASNCMSALFAIDWYRGYTKGIQEVMIGYSDSAKDAGVMAAAWAQYTAQ EKLVAISQEANIKLTLFHGRGGTIGRGGGPAHQAILSQPPGSVDGRIRVTEQGEMIRFKFGLPKLAVQSLALYTSAVMEA TLLPPPEPKPEWRQCMQQLADESVVAYRAIVREEPDFVSYFRAATPEIELGKLPLGSRPAKRRVDGGIESLRAIPWIFAW SQNRLMLPAWLGAGEALKAASERGDLALLQEMEKHWPFFKTRISMLEMVYAKAEPNLSKFYETSLVPSELHHLGVQLRER LATGVEAVLELTQAESLMAHTPWNRESVELRNPYIDPLNFLQAELLARTRREEQSSQNVELALMLTIAGVAAGMRNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=885, Percent_Identity=55.7062146892655, Blast_Score=969, Evalue=0.0,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 98789; Mature: 98789
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDMYASLRSNVGTLGQILGDTIRTDLDDTFLEKIEQIRHLAKSSRQGDDASREEMLTLL CCCHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH SSLSDDELVPFAKAFNQFLNLANIAEQFHTISRNCDELVCVPDPVEQLLGRMLGGKIDQE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCHH KVLACLKTLDIDLVLTAHPTEISRRTLIQKYSAVIDSLTALENTQLTEQEKKQHHLRLRQ HHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LIAQIWHTNEIRNERPTPVDEARWGLSTIEASLWQAIPDFLRQLNQQVEERTNTQLPIDI HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE APVRFSSWMGGDRDGNPFVTSTVTQEVLDRNRHTAARLYLKDVVLLVNELSMEGANEELL ECCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH AYCNNSNEPYRDVLRDLRKKLRATIDYLNEKLEGHQPDVNPKDIIWHESDLKDPLMMLYK HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCHHHHHHH SLCDQGMSLIANGLLLDMLRRIACFGIHMLRLDVRQDAQRHADVIAELTRYLGMGDYAHW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DESEKQSFLLRELSSKRPLIPANWQASAEVEEVVKTCRLVASQPARAMGSYVISMASQPS CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH DVLAVLLLLKETGCPHPIRVVPLFETLDDLNNASNCMSALFAIDWYRGYTKGIQEVMIGY HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SDSAKDAGVMAAAWAQYTAQEKLVAISQEANIKLTLFHGRGGTIGRGGGPAHQAILSQPP CCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCC GSVDGRIRVTEQGEMIRFKFGLPKLAVQSLALYTSAVMEATLLPPPEPKPEWRQCMQQLA CCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DESVVAYRAIVREEPDFVSYFRAATPEIELGKLPLGSRPAKRRVDGGIESLRAIPWIFAW HHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEE SQNRLMLPAWLGAGEALKAASERGDLALLQEMEKHWPFFKTRISMLEMVYAKAEPNLSKF CCCCEEEEHHCCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHH YETSLVPSELHHLGVQLRERLATGVEAVLELTQAESLMAHTPWNRESVELRNPYIDPLNF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHH LQAELLARTRREEQSSQNVELALMLTIAGVAAGMRNTG HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCC >Mature Secondary Structure MVDMYASLRSNVGTLGQILGDTIRTDLDDTFLEKIEQIRHLAKSSRQGDDASREEMLTLL CCCHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH SSLSDDELVPFAKAFNQFLNLANIAEQFHTISRNCDELVCVPDPVEQLLGRMLGGKIDQE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCHH KVLACLKTLDIDLVLTAHPTEISRRTLIQKYSAVIDSLTALENTQLTEQEKKQHHLRLRQ HHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LIAQIWHTNEIRNERPTPVDEARWGLSTIEASLWQAIPDFLRQLNQQVEERTNTQLPIDI HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE APVRFSSWMGGDRDGNPFVTSTVTQEVLDRNRHTAARLYLKDVVLLVNELSMEGANEELL ECCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH AYCNNSNEPYRDVLRDLRKKLRATIDYLNEKLEGHQPDVNPKDIIWHESDLKDPLMMLYK HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCHHHHHHH SLCDQGMSLIANGLLLDMLRRIACFGIHMLRLDVRQDAQRHADVIAELTRYLGMGDYAHW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DESEKQSFLLRELSSKRPLIPANWQASAEVEEVVKTCRLVASQPARAMGSYVISMASQPS CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH DVLAVLLLLKETGCPHPIRVVPLFETLDDLNNASNCMSALFAIDWYRGYTKGIQEVMIGY HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SDSAKDAGVMAAAWAQYTAQEKLVAISQEANIKLTLFHGRGGTIGRGGGPAHQAILSQPP CCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCC GSVDGRIRVTEQGEMIRFKFGLPKLAVQSLALYTSAVMEATLLPPPEPKPEWRQCMQQLA CCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DESVVAYRAIVREEPDFVSYFRAATPEIELGKLPLGSRPAKRRVDGGIESLRAIPWIFAW HHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEE SQNRLMLPAWLGAGEALKAASERGDLALLQEMEKHWPFFKTRISMLEMVYAKAEPNLSKF CCCCEEEEHHCCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHH YETSLVPSELHHLGVQLRERLATGVEAVLELTQAESLMAHTPWNRESVELRNPYIDPLNF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHH LQAELLARTRREEQSSQNVELALMLTIAGVAAGMRNTG HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA