Click here to switch to the map view.

The map label for this gene is secE [H]

Identifier: 157960001

GI number: 157960001

Start: 193561

End: 193932

Strand: Direct

Name: secE [H]

Synonym: Spea_0171

Alternate gene names: 157960001

Gene position: 193561-193932 (Clockwise)

Preceding gene: 157960000

Following gene: 157960002

Centisome position: 3.74

GC content: 40.86

Gene sequence:

>372_bases
ATGACAACAAATACTGAAAGCCAGGGTAACTCTCTGGATATCGTAAAGTGGGGCCTAGTCGTAATCTTGTTGGCTGCTGC
AATTATTGGCAATCAATATTTTAATGAAGCAAGTGTCGTTGTTCGCGCCCTTGGTGTAATAGTGACTTTTGCCATTGCTG
GTTTCATCGCGTTGCAAACAGAAAAAGGCAAGCAAGCTTTAACTTTTGCTCGTGAATCACAGATTGAAGTTCGTAAAGTG
GTTTGGCCAACGCGTCAAGAAGCACTCAATACAACTTTCATTGTATTAGCTGCAACAGCCGTTTTAGGTTTAATCCTTTG
GGGCTTAGACGCAGTATTGCTTAGAATTGTTAATTTTATTACAGGCGTATAG

Upstream 100 bases:

>100_bases
GCCAGTTCGGATAGCGAGTCTGACTGAATTTTTCACTGAGCAAAATGCTATTTTTATAGTGTCACTTGACTCAGAACGTA
GTGAGTAACGGAATTAACCG

Downstream 100 bases:

>100_bases
GCATTAAGTATGACTGAAGCTACTGAAGCTAAAAAGAGATGGTATGTTATTCAAGCGTTTTCCGGCTATGAAGGCCGTGT
ATGTAAAACTTTGCTTGAAC

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTTNTESQGNSLDIVKWGLVVILLAAAIIGNQYFNEASVVVRALGVIVTFAIAGFIALQTEKGKQALTFARESQIEVRKV
VWPTRQEALNTTFIVLAATAVLGLILWGLDAVLLRIVNFITGV

Sequences:

>Translated_123_residues
MTTNTESQGNSLDIVKWGLVVILLAAAIIGNQYFNEASVVVRALGVIVTFAIAGFIALQTEKGKQALTFARESQIEVRKV
VWPTRQEALNTTFIVLAATAVLGLILWGLDAVLLRIVNFITGV
>Mature_122_residues
TTNTESQGNSLDIVKWGLVVILLAAAIIGNQYFNEASVVVRALGVIVTFAIAGFIALQTEKGKQALTFARESQIEVRKVV
WPTRQEALNTTFIVLAATAVLGLILWGLDAVLLRIVNFITGV

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=125, Percent_Identity=54.4, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13285; Mature: 13154

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNTESQGNSLDIVKWGLVVILLAAAIIGNQYFNEASVVVRALGVIVTFAIAGFIALQT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EKGKQALTFARESQIEVRKVVWPTRQEALNTTFIVLAATAVLGLILWGLDAVLLRIVNFI
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGV
HCC
>Mature Secondary Structure 
TTNTESQGNSLDIVKWGLVVILLAAAIIGNQYFNEASVVVRALGVIVTFAIAGFIALQT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EKGKQALTFARESQIEVRKVVWPTRQEALNTTFIVLAATAVLGLILWGLDAVLLRIVNFI
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGV
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]