| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is exeH [H]
Identifier: 157959978
GI number: 157959978
Start: 165175
End: 165807
Strand: Direct
Name: exeH [H]
Synonym: Spea_0148
Alternate gene names: 157959978
Gene position: 165175-165807 (Clockwise)
Preceding gene: 157959977
Following gene: 157959979
Centisome position: 3.19
GC content: 46.6
Gene sequence:
>633_bases ATGATATCGGAAACTGGAACCTACAGAATTTCCAATAATATGAGCTTGCTGCGATTGAACTTAGCACGCCAAACGGGCTT CACCTTAATGGAGGTGTTGCTCGTTGTTTTGCTTATGGGCTTGGCCGCAACTGCTGTCACCCTTGGCATGGGCGGGGCGA GTAAAGAAAAGGCGCTAGAACGCACCGCGCAGCAGTTCATGATGTCTACCGAAATGGTGCTAGATGAAACGGTTCTAAGC GGCCATTTCGTGGGCATAGTGATCGAAGACAATAGCTATAAATACGTTTATTACGATGAGGGTAAGTGGAAGCCTTTAGA GCAAGATAGATTGCTCGCTGAGCGTCAGATGGAACCTGGTGTTGAGATGGTGCTGGTGCTCGATGGTTTACCTTTAGTTC AAGATGACGAAGAACAAGATTCTTGGTTTGATGAGCCCCTTATTGAAAAATCCGCCGACGAAAAGAAGAAGTTTCCTGAG CCGCAGATCATGTTATTCCCGAGTGGTGAGATGAGTGCGTTTGAGCTGTCTTTCGTTAGCGAAGATGAAACGAAGCAAGA TATCGAAGTTGTGGTATTCGGTGATGCCTTGGGTCGCTTACGTATGGGTTTCGAAGATGAAGAAGTCTTATGA
Upstream 100 bases:
>100_bases CAAGATCCATGGCGTAACGATTACCTGCTATTGAGTCCAGGTGAAAACGGTAAATTAGATATCTTCAGCTCAGGCCCAGA CGGTCAGGCAGGTACTGAAG
Downstream 100 bases:
>100_bases GCAGGCGAACTGATCAAACAGGTATGACGCTGCTAGAAGTGATTGTTGCCTTGGCGGTATTTTCTATCGCCGCAGTTTCT ATCACTAAGAGCTTAGGCGA
Product: general secretion pathway protein H
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MISETGTYRISNNMSLLRLNLARQTGFTLMEVLLVVLLMGLAATAVTLGMGGASKEKALERTAQQFMMSTEMVLDETVLS GHFVGIVIEDNSYKYVYYDEGKWKPLEQDRLLAERQMEPGVEMVLVLDGLPLVQDDEEQDSWFDEPLIEKSADEKKKFPE PQIMLFPSGEMSAFELSFVSEDETKQDIEVVVFGDALGRLRMGFEDEEVL
Sequences:
>Translated_210_residues MISETGTYRISNNMSLLRLNLARQTGFTLMEVLLVVLLMGLAATAVTLGMGGASKEKALERTAQQFMMSTEMVLDETVLS GHFVGIVIEDNSYKYVYYDEGKWKPLEQDRLLAERQMEPGVEMVLVLDGLPLVQDDEEQDSWFDEPLIEKSADEKKKFPE PQIMLFPSGEMSAFELSFVSEDETKQDIEVVVFGDALGRLRMGFEDEEVL >Mature_210_residues MISETGTYRISNNMSLLRLNLARQTGFTLMEVLLVVLLMGLAATAVTLGMGGASKEKALERTAQQFMMSTEMVLDETVLS GHFVGIVIEDNSYKYVYYDEGKWKPLEQDRLLAERQMEPGVEMVLVLDGLPLVQDDEEQDSWFDEPLIEKSADEKKKFPE PQIMLFPSGEMSAFELSFVSEDETKQDIEVVVFGDALGRLRMGFEDEEVL
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP H family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002416 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR022346 [H]
Pfam domain/function: PF12019 GspH [H]
EC number: NA
Molecular weight: Translated: 23723; Mature: 23723
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISETGTYRISNNMSLLRLNLARQTGFTLMEVLLVVLLMGLAATAVTLGMGGASKEKALE CCCCCCCEEEECCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RTAQQFMMSTEMVLDETVLSGHFVGIVIEDNSYKYVYYDEGKWKPLEQDRLLAERQMEPG HHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCC VEMVLVLDGLPLVQDDEEQDSWFDEPLIEKSADEKKKFPEPQIMLFPSGEMSAFELSFVS CEEEEEECCCCCCCCCCCCHHHCCCHHHHCCCHHHHCCCCCCEEEEECCCCCEEEEEECC EDETKQDIEVVVFGDALGRLRMGFEDEEVL CCCCCCCEEEEEECCCHHHHHCCCCCCCCC >Mature Secondary Structure MISETGTYRISNNMSLLRLNLARQTGFTLMEVLLVVLLMGLAATAVTLGMGGASKEKALE CCCCCCCEEEECCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RTAQQFMMSTEMVLDETVLSGHFVGIVIEDNSYKYVYYDEGKWKPLEQDRLLAERQMEPG HHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCC VEMVLVLDGLPLVQDDEEQDSWFDEPLIEKSADEKKKFPEPQIMLFPSGEMSAFELSFVS CEEEEEECCCCCCCCCCCCHHHCCCHHHHCCCHHHHCCCCCCEEEEECCCCCEEEEEECC EDETKQDIEVVVFGDALGRLRMGFEDEEVL CCCCCCCEEEEEECCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]