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The map label for this gene is yhbQ [C]

Identifier: 157959963

GI number: 157959963

Start: 149083

End: 149442

Strand: Direct

Name: yhbQ [C]

Synonym: Spea_0133

Alternate gene names: 157959963

Gene position: 149083-149442 (Clockwise)

Preceding gene: 157959962

Following gene: 157959966

Centisome position: 2.88

GC content: 47.5

Gene sequence:

>360_bases
ATGCATAACTCCGTAGAGACAGTTATCGAGCCGGCAAAGGTGCAAGACCCAGCAAGCGACATCAAAGTGAGTAAAGCTAA
AGTTATTGAAACCAAGGCAAGCGAAACTATGTGGTATCTGTATATGGTGCGCTGTGCAAACGGCCACCTCTATACTGGGA
TAACAACAGATGTGGCTCGCCGTTTTAGCGAGCATCAAAGTGGTAGTGCAAAATCGGCCAAGTTTCTTCGAGGCAAAGGG
CCATTAACTTTGGCATATTCTGAAACTGTGGGTAATCACTCCGATGCTCTGAAGCGGGAGATAGCGTTAAAGAAGTACTC
GAGAGCCAACAAGCTGGCCTTGATCGCAGCGCGAGATTAA

Upstream 100 bases:

>100_bases
GCAAGAGTGGCCGCTATCGCCAATATGAGGATACCGCTAAAGAGTATGCCTTCTTCTTAGGTTTGCTAGGGTTAGATACT
GCTAAGAATACTAGTCGCTA

Downstream 100 bases:

>100_bases
GCACTTGCAGTGTTAGGTTAAGTATTGATGGCGTAACCACTTACAGAGGTTACGCCATGTACTGACTTGAGTTAACAGTG
TTTACCCGCCATAAAGGCTA

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MHNSVETVIEPAKVQDPASDIKVSKAKVIETKASETMWYLYMVRCANGHLYTGITTDVARRFSEHQSGSAKSAKFLRGKG
PLTLAYSETVGNHSDALKREIALKKYSRANKLALIAARD

Sequences:

>Translated_119_residues
MHNSVETVIEPAKVQDPASDIKVSKAKVIETKASETMWYLYMVRCANGHLYTGITTDVARRFSEHQSGSAKSAKFLRGKG
PLTLAYSETVGNHSDALKREIALKKYSRANKLALIAARD
>Mature_119_residues
MHNSVETVIEPAKVQDPASDIKVSKAKVIETKASETMWYLYMVRCANGHLYTGITTDVARRFSEHQSGSAKSAKFLRGKG
PLTLAYSETVGNHSDALKREIALKKYSRANKLALIAARD

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=81, Percent_Identity=53.0864197530864, Blast_Score=87, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022992
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 13140; Mature: 13140

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNSVETVIEPAKVQDPASDIKVSKAKVIETKASETMWYLYMVRCANGHLYTGITTDVAR
CCCCHHHHCCCCCCCCCHHHCEECHHHEEECCCCCCEEEEEEEEECCCEEEECCHHHHHH
RFSEHQSGSAKSAKFLRGKGPLTLAYSETVGNHSDALKREIALKKYSRANKLALIAARD
HHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MHNSVETVIEPAKVQDPASDIKVSKAKVIETKASETMWYLYMVRCANGHLYTGITTDVAR
CCCCHHHHCCCCCCCCCHHHCEECHHHEEECCCCCCEEEEEEEEECCCEEEECCHHHHHH
RFSEHQSGSAKSAKFLRGKGPLTLAYSETVGNHSDALKREIALKKYSRANKLALIAARD
HHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA