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The map label for this gene is opsX [H]

Identifier: 157959941

GI number: 157959941

Start: 124517

End: 125596

Strand: Direct

Name: opsX [H]

Synonym: Spea_0111

Alternate gene names: 157959941

Gene position: 124517-125596 (Clockwise)

Preceding gene: 157959939

Following gene: 157959942

Centisome position: 2.41

GC content: 47.5

Gene sequence:

>1080_bases
ATGAGCCTATCAACTTCAAGTGACAATCCGAACTTAAAATCAAGCAGCTTAGACTTAAGTCAGGCTGAGTCTTTATGCCT
TCTGAGGTTGTCGGCAATCGGTGATGTTTGTCATGCCGTGGCCATGGTGCAGGCTATTCAGCGCCGTTATCCACAGCTTA
AAATCACTTGGATTTTGGGTAAGGTCGAATATCAATTGCTTAAGCATCTTGAAGGTGTGGAGTTTGTGATTTTTGATAAG
TCACAAGGCTGGCGCAGCTACTTTAACCTTAAGCGCTCTTTAAAAGGTCGCAAGTTTGATGTGTTACTGCATATGCAGAT
TGCCCTGCGCGCGACGATTGCCTCATTAGCTATCTCGGCTAAAACTCGTATCGGCTTCGATCGATTTAGAGCCAAAGAAG
GGCAGTGGTTGGTGACAAATCACCACATTGAGCCGCAAGCAACGCCTCATGTTCTCGAGGGATTTATGGGCTTTGCTAAA
GCGGTAGGCGTTACCGACTTGACTCCAAGCTGGAATATACCTGTTCCCGTGATCGATACTGAATTTGCCGAGACGCTAAT
TCCCACTGGCACGCCAGTAATGGTTATCTGTGCAGCGGCGAGTAAAGCTGAGCGTAATTGGTTACCAGAGCGATATGCCG
CAGTTGCAGATCATGCTGTAGCGAAAGGTTATCGAGTCATCCTATGCGGCGGTCCTACGCCACTTGAGCGTGAACTTGCC
GAGAATATACAAGCAACGGCTCAATCAGAGTTAGAGAATCAAGTCGGCAAAACCTCTTTGCTGCAACTGTTAGCAATACT
TAAGCAAGCGAGTGTGGTGCTGGCACCCGATACCGGGCCGGCACACATGGCTGTGACTCAAGGTACACCCGTTATTGGCT
TATATGCTCATTCAAACCCAGGACGAACCGGCCCATATACCTGTTTAGATTCAGTGGTTAGCGTTTATGACAAAGTGATT
AGTGAGCAGAAACAAGGTGATATTCCTTGGGGGACTAGGGCTAAGGGGGGGCATTTGATGGAGTTGATTGCTGTAGACAG
TGTTGTTGCCCAGTTAGATCGTTTGTTAGAACAACCATAA

Upstream 100 bases:

>100_bases
TTTTTTAAACTTCATAGATAGAATTGTAAGCTAAAGCGTGGAACCTGCAGGCATTCTACATTAAGATCGGTAGATTGCGT
TAAATAACCTTCGAGCACTA

Downstream 100 bases:

>100_bases
GCATAAATTTTTGTTAGTATGCCCATTAGCATAGTGCTTCTTCGTAGTTTGATGAGTTGACTCAATGACCCTAGCCGCCC
CTAAATTTCTATTTGTGCCC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSLSTSSDNPNLKSSSLDLSQAESLCLLRLSAIGDVCHAVAMVQAIQRRYPQLKITWILGKVEYQLLKHLEGVEFVIFDK
SQGWRSYFNLKRSLKGRKFDVLLHMQIALRATIASLAISAKTRIGFDRFRAKEGQWLVTNHHIEPQATPHVLEGFMGFAK
AVGVTDLTPSWNIPVPVIDTEFAETLIPTGTPVMVICAAASKAERNWLPERYAAVADHAVAKGYRVILCGGPTPLERELA
ENIQATAQSELENQVGKTSLLQLLAILKQASVVLAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYTCLDSVVSVYDKVI
SEQKQGDIPWGTRAKGGHLMELIAVDSVVAQLDRLLEQP

Sequences:

>Translated_359_residues
MSLSTSSDNPNLKSSSLDLSQAESLCLLRLSAIGDVCHAVAMVQAIQRRYPQLKITWILGKVEYQLLKHLEGVEFVIFDK
SQGWRSYFNLKRSLKGRKFDVLLHMQIALRATIASLAISAKTRIGFDRFRAKEGQWLVTNHHIEPQATPHVLEGFMGFAK
AVGVTDLTPSWNIPVPVIDTEFAETLIPTGTPVMVICAAASKAERNWLPERYAAVADHAVAKGYRVILCGGPTPLERELA
ENIQATAQSELENQVGKTSLLQLLAILKQASVVLAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYTCLDSVVSVYDKVI
SEQKQGDIPWGTRAKGGHLMELIAVDSVVAQLDRLLEQP
>Mature_358_residues
SLSTSSDNPNLKSSSLDLSQAESLCLLRLSAIGDVCHAVAMVQAIQRRYPQLKITWILGKVEYQLLKHLEGVEFVIFDKS
QGWRSYFNLKRSLKGRKFDVLLHMQIALRATIASLAISAKTRIGFDRFRAKEGQWLVTNHHIEPQATPHVLEGFMGFAKA
VGVTDLTPSWNIPVPVIDTEFAETLIPTGTPVMVICAAASKAERNWLPERYAAVADHAVAKGYRVILCGGPTPLERELAE
NIQATAQSELENQVGKTSLLQLLAILKQASVVLAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYTCLDSVVSVYDKVIS
EQKQGDIPWGTRAKGGHLMELIAVDSVVAQLDRLLEQP

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=291, Percent_Identity=19.5876288659794, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39238; Mature: 39107

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSTSSDNPNLKSSSLDLSQAESLCLLRLSAIGDVCHAVAMVQAIQRRYPQLKITWILG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH
KVEYQLLKHLEGVEFVIFDKSQGWRSYFNLKRSLKGRKFDVLLHMQIALRATIASLAISA
HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHH
KTRIGFDRFRAKEGQWLVTNHHIEPQATPHVLEGFMGFAKAVGVTDLTPSWNIPVPVIDT
HHHCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECH
EFAETLIPTGTPVMVICAAASKAERNWLPERYAAVADHAVAKGYRVILCGGPTPLERELA
HHHHHHCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
ENIQATAQSELENQVGKTSLLQLLAILKQASVVLAPDTGPAHMAVTQGTPVIGLYAHSNP
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCEEEEEEECCC
GRTGPYTCLDSVVSVYDKVISEQKQGDIPWGTRAKGGHLMELIAVDSVVAQLDRLLEQP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLSTSSDNPNLKSSSLDLSQAESLCLLRLSAIGDVCHAVAMVQAIQRRYPQLKITWILG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH
KVEYQLLKHLEGVEFVIFDKSQGWRSYFNLKRSLKGRKFDVLLHMQIALRATIASLAISA
HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHH
KTRIGFDRFRAKEGQWLVTNHHIEPQATPHVLEGFMGFAKAVGVTDLTPSWNIPVPVIDT
HHHCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECH
EFAETLIPTGTPVMVICAAASKAERNWLPERYAAVADHAVAKGYRVILCGGPTPLERELA
HHHHHHCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
ENIQATAQSELENQVGKTSLLQLLAILKQASVVLAPDTGPAHMAVTQGTPVIGLYAHSNP
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCEEEEEEECCC
GRTGPYTCLDSVVSVYDKVISEQKQGDIPWGTRAKGGHLMELIAVDSVVAQLDRLLEQP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]