| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is kbl [C]
Identifier: 157959937
GI number: 157959937
Start: 120102
End: 121298
Strand: Reverse
Name: kbl [C]
Synonym: Spea_0107
Alternate gene names: 157959937
Gene position: 121298-120102 (Counterclockwise)
Preceding gene: 157959938
Following gene: 157959936
Centisome position: 2.34
GC content: 47.7
Gene sequence:
>1197_bases GTGCCTAAGACCTCATTCTACGACCAAATAAATCAACAGCTTGTCGACGTTAAAGCCGAAGGTTTGTATAAAAGCGAACG AATCATTGTTTCTCCTCAACAAACTGCAATTAAAGTTAATGGCGACCAAGTTATTAATTTTTGTGCCAACAACTACCTAG GTTTAGCTAACCACCCAGAGCTTATTAAGGCAGCACAAGCTGGCCTAGACGCTCACGGTTTTGGCATGGCATCTGTGCGC TTTATCTGCGGCACCCAAGATATCCATAAGCAACTAGAAGCGAGCCTTAGCGAATTTTTAGGCATGGAAGACACCATTCT TTACTCTTCATGCTTCGACGCTAACGCCGGTCTTTTCGAAACCCTATTAAGCGCAGAAGACGCGATTATTTCTGATGCAC TAAACCACGCATCTATTATCGATGGCGTGCGTCTATGTAAGGCGAAGCGCTTCCGCTACGCTAACAACGACATGGCAGAT TTAGAGGCGCAACTTATCGCCGCTAAAGAAGCTGGCGCTCGCAACATCATGATCGCTACCGACGGCGTGTTCTCAATGGA CGGCGTAATTGCCAACCTAAAAGGTGTGTGTGATCTTGCTGACAAGTACGGCGCACTCGTGATGGTTGATGACTCACATG CCGTAGGCTTTGTTGGCCAAGAAGGCCGTGGTACTCACGAGTATTGTGAAGTGATGGATCGCGTAGACATCATCACAGGT ACTTTAGGTAAAGCCCTTGGTGGTGCATCAGGTGGATTCACTTCTGGTAAAAAAGAAGTCATCGACTGGTTGCGTCAACG CTCTCGCCCTTACCTATTCTCAAACTCATTAGCGCCATCAATCGTCACGGCATCTATCCATGTACTTGAGATGCTCAAAT CTGGCCAAGCGCTACGCGAAGCTGTTTGGGAAAATAGCCGTTACTTCCGCGAGCAGATGTCTGCGGCAGGCTTCACCCTA GGTGGCGCCGATCACGCCATTATTCCTGTAATGATTGGTGACGCAAAACTGGCTGGCGATTTTGCTAACCGTCTATTAAC TGAAAACATCTACGTTATCGGTTTCTCATTCCCTGTGGTACCAAAGGGTCAGGCACGTATTCGAACTCAGATGTCTGCAG CTCACACCAAAGAGCAGATCGACAAGGCAATTGAAGCCTTTACCCGTATCGCGAAAGAGATGGGTATCATCAGCTAA
Upstream 100 bases:
>100_bases CCCGGTTTTAGTCTTAAAAAAAGGCTGTAGAGCCGCGGCAATTAGGGTTAAAATGCCAGCACTCCAATACTCAAAATAAT GCTAATTAAGGAGAATAAAG
Downstream 100 bases:
>100_bases AATCAAATCAATAGGGGCTACGTATGTAGCCCTTTTTGAATGACATTCAGCAAGCCGCAAGCCGGCCTGTAATAGGTTAT AAAATGAAAGCACTCAGCAA
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MPKTSFYDQINQQLVDVKAEGLYKSERIIVSPQQTAIKVNGDQVINFCANNYLGLANHPELIKAAQAGLDAHGFGMASVR FICGTQDIHKQLEASLSEFLGMEDTILYSSCFDANAGLFETLLSAEDAIISDALNHASIIDGVRLCKAKRFRYANNDMAD LEAQLIAAKEAGARNIMIATDGVFSMDGVIANLKGVCDLADKYGALVMVDDSHAVGFVGQEGRGTHEYCEVMDRVDIITG TLGKALGGASGGFTSGKKEVIDWLRQRSRPYLFSNSLAPSIVTASIHVLEMLKSGQALREAVWENSRYFREQMSAAGFTL GGADHAIIPVMIGDAKLAGDFANRLLTENIYVIGFSFPVVPKGQARIRTQMSAAHTKEQIDKAIEAFTRIAKEMGIIS
Sequences:
>Translated_398_residues MPKTSFYDQINQQLVDVKAEGLYKSERIIVSPQQTAIKVNGDQVINFCANNYLGLANHPELIKAAQAGLDAHGFGMASVR FICGTQDIHKQLEASLSEFLGMEDTILYSSCFDANAGLFETLLSAEDAIISDALNHASIIDGVRLCKAKRFRYANNDMAD LEAQLIAAKEAGARNIMIATDGVFSMDGVIANLKGVCDLADKYGALVMVDDSHAVGFVGQEGRGTHEYCEVMDRVDIITG TLGKALGGASGGFTSGKKEVIDWLRQRSRPYLFSNSLAPSIVTASIHVLEMLKSGQALREAVWENSRYFREQMSAAGFTL GGADHAIIPVMIGDAKLAGDFANRLLTENIYVIGFSFPVVPKGQARIRTQMSAAHTKEQIDKAIEAFTRIAKEMGIIS >Mature_397_residues PKTSFYDQINQQLVDVKAEGLYKSERIIVSPQQTAIKVNGDQVINFCANNYLGLANHPELIKAAQAGLDAHGFGMASVRF ICGTQDIHKQLEASLSEFLGMEDTILYSSCFDANAGLFETLLSAEDAIISDALNHASIIDGVRLCKAKRFRYANNDMADL EAQLIAAKEAGARNIMIATDGVFSMDGVIANLKGVCDLADKYGALVMVDDSHAVGFVGQEGRGTHEYCEVMDRVDIITGT LGKALGGASGGFTSGKKEVIDWLRQRSRPYLFSNSLAPSIVTASIHVLEMLKSGQALREAVWENSRYFREQMSAAGFTLG GADHAIIPVMIGDAKLAGDFANRLLTENIYVIGFSFPVVPKGQARIRTQMSAAHTKEQIDKAIEAFTRIAKEMGIIS
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=387, Percent_Identity=54.5219638242894, Blast_Score=439, Evalue=1e-123, Organism=Homo sapiens, GI284448556, Length=416, Percent_Identity=50.7211538461538, Blast_Score=429, Evalue=1e-120, Organism=Homo sapiens, GI83977442, Length=344, Percent_Identity=35.1744186046512, Blast_Score=221, Evalue=6e-58, Organism=Homo sapiens, GI83977440, Length=344, Percent_Identity=35.1744186046512, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI83977444, Length=344, Percent_Identity=35.1744186046512, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI4502025, Length=363, Percent_Identity=33.0578512396694, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI40316939, Length=363, Percent_Identity=33.0578512396694, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI4758668, Length=358, Percent_Identity=36.5921787709497, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI119220554, Length=368, Percent_Identity=33.4239130434783, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI5454084, Length=261, Percent_Identity=31.4176245210728, Blast_Score=123, Evalue=3e-28, Organism=Escherichia coli, GI1790046, Length=397, Percent_Identity=75.8186397984887, Blast_Score=634, Evalue=0.0, Organism=Escherichia coli, GI1786993, Length=347, Percent_Identity=33.7175792507205, Blast_Score=191, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71994529, Length=399, Percent_Identity=55.1378446115288, Blast_Score=445, Evalue=1e-125, Organism=Caenorhabditis elegans, GI32566772, Length=371, Percent_Identity=32.3450134770889, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17560912, Length=361, Percent_Identity=33.7950138504155, Blast_Score=188, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17560914, Length=361, Percent_Identity=33.7950138504155, Blast_Score=188, Evalue=4e-48, Organism=Caenorhabditis elegans, GI71982617, Length=380, Percent_Identity=23.1578947368421, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71982625, Length=380, Percent_Identity=23.1578947368421, Blast_Score=109, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6320438, Length=378, Percent_Identity=32.8042328042328, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6320267, Length=373, Percent_Identity=30.2949061662198, Blast_Score=175, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6323954, Length=264, Percent_Identity=28.7878787878788, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24662918, Length=390, Percent_Identity=57.948717948718, Blast_Score=474, Evalue=1e-134, Organism=Drosophila melanogaster, GI17137420, Length=349, Percent_Identity=32.6647564469914, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI17136286, Length=411, Percent_Identity=32.360097323601, Blast_Score=192, Evalue=2e-49, Organism=Drosophila melanogaster, GI24653280, Length=392, Percent_Identity=25, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24653276, Length=392, Percent_Identity=25, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24653278, Length=392, Percent_Identity=25, Blast_Score=117, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011282 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 43129; Mature: 42998
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTSFYDQINQQLVDVKAEGLYKSERIIVSPQQTAIKVNGDQVINFCANNYLGLANHPE CCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECHHHHHHHHHCCCCCCCCCHH LIKAAQAGLDAHGFGMASVRFICGTQDIHKQLEASLSEFLGMEDTILYSSCFDANAGLFE HHHHHHCCCCCCCCCHHHEEEEECCHHHHHHHHHHHHHHCCCCHHEEEHHCCCCCCHHHH TLLSAEDAIISDALNHASIIDGVRLCKAKRFRYANNDMADLEAQLIAAKEAGARNIMIAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEE DGVFSMDGVIANLKGVCDLADKYGALVMVDDSHAVGFVGQEGRGTHEYCEVMDRVDIITG CCCEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHH TLGKALGGASGGFTSGKKEVIDWLRQRSRPYLFSNSLAPSIVTASIHVLEMLKSGQALRE HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHH AVWENSRYFREQMSAAGFTLGGADHAIIPVMIGDAKLAGDFANRLLTENIYVIGFSFPVV HHHCCHHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCC PKGQARIRTQMSAAHTKEQIDKAIEAFTRIAKEMGIIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PKTSFYDQINQQLVDVKAEGLYKSERIIVSPQQTAIKVNGDQVINFCANNYLGLANHPE CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECHHHHHHHHHCCCCCCCCCHH LIKAAQAGLDAHGFGMASVRFICGTQDIHKQLEASLSEFLGMEDTILYSSCFDANAGLFE HHHHHHCCCCCCCCCHHHEEEEECCHHHHHHHHHHHHHHCCCCHHEEEHHCCCCCCHHHH TLLSAEDAIISDALNHASIIDGVRLCKAKRFRYANNDMADLEAQLIAAKEAGARNIMIAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEE DGVFSMDGVIANLKGVCDLADKYGALVMVDDSHAVGFVGQEGRGTHEYCEVMDRVDIITG CCCEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHH TLGKALGGASGGFTSGKKEVIDWLRQRSRPYLFSNSLAPSIVTASIHVLEMLKSGQALRE HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHH AVWENSRYFREQMSAAGFTLGGADHAIIPVMIGDAKLAGDFANRLLTENIYVIGFSFPVV HHHCCHHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCC PKGQARIRTQMSAAHTKEQIDKAIEAFTRIAKEMGIIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]