Click here to switch to the map view.

The map label for this gene is fliP [H]

Identifier: 157959919

GI number: 157959919

Start: 98638

End: 99366

Strand: Direct

Name: fliP [H]

Synonym: Spea_0089

Alternate gene names: 157959919

Gene position: 98638-99366 (Clockwise)

Preceding gene: 157959918

Following gene: 157959920

Centisome position: 1.91

GC content: 45.82

Gene sequence:

>729_bases
ATGTGGCGAGTTTTGCTGATTTTACTCTTAGGCTTCTCATCGACGGCATATGCCAATGATGGCTTAACATTATTCACGTT
AAATGATGGTGCAGAGTCTGAGTCTGTGAGCGTAAAGTTGGAAATTTTGGCATTGATGACAGTGCTAAGTTTCCTACCAG
CTATGTTGATGATGCTGACCAGTTTTACGCGCATCATTGTGGTATTGGGAATACTACGTCAAGCATTAGGCTTGCAGCAA
AGCCCCCCCAATAAGGTGTTGATCGGAATCGCATTGGTGATGACCATATTTATCATGCGCCCCGTTGGTGAAGAGATTTA
TGAGAAAGCTTTCCTACCTTACGATCAGGGCATAATTGAGTTACCTGAGGCGGTAGAGCGTGGAGAAAAGCCGCTGCGTC
AGTTTATGTTGGCACAAACTCGCGAAACCGATCTTGAGCAGATGCTAAAGATTGCCGACGAGCCGACAACCTTGACCGCC
GAGGAGATCCCGTTTTTTGTACTGATGCCAGCCTATGTCTTGAGTGAGTTGAAAACGGCTTTTCAGATTGGCTTCTTGCT
GTTTCTGCCTTTTTTGGTGATCGACTTGGTGGTTGCCAGCGTGTTGATGTCTATGGGCATGATGATGCTGTCACCGCTGA
TCATTTCCTTACCATTTAAATTAATGGTGTTTGTATTAGTCGATGGCTGGTCGATGACGGTGAGTACCTTAGTGGCCAGT
TATGGTTAG

Upstream 100 bases:

>100_bases
CCTTACTCGGTAGAGGTGAAGTGGTTGAGGTTAATGGCCGCTATGGTGTGCGCTTACTTGAAGTGGAAGCTATCAGTCTA
ACAGGAGCAAATGACTGATT

Downstream 100 bases:

>100_bases
CCTGAATTCTTTAGCACGATTGGGAAGGTTTTTAAATGAGTATTAGGCTGCAAGATGAGCTGGAATTCACTGTCTCCATC
GCCGATATTATTTATCTGTT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MWRVLLILLLGFSSTAYANDGLTLFTLNDGAESESVSVKLEILALMTVLSFLPAMLMMLTSFTRIIVVLGILRQALGLQQ
SPPNKVLIGIALVMTIFIMRPVGEEIYEKAFLPYDQGIIELPEAVERGEKPLRQFMLAQTRETDLEQMLKIADEPTTLTA
EEIPFFVLMPAYVLSELKTAFQIGFLLFLPFLVIDLVVASVLMSMGMMMLSPLIISLPFKLMVFVLVDGWSMTVSTLVAS
YG

Sequences:

>Translated_242_residues
MWRVLLILLLGFSSTAYANDGLTLFTLNDGAESESVSVKLEILALMTVLSFLPAMLMMLTSFTRIIVVLGILRQALGLQQ
SPPNKVLIGIALVMTIFIMRPVGEEIYEKAFLPYDQGIIELPEAVERGEKPLRQFMLAQTRETDLEQMLKIADEPTTLTA
EEIPFFVLMPAYVLSELKTAFQIGFLLFLPFLVIDLVVASVLMSMGMMMLSPLIISLPFKLMVFVLVDGWSMTVSTLVAS
YG
>Mature_242_residues
MWRVLLILLLGFSSTAYANDGLTLFTLNDGAESESVSVKLEILALMTVLSFLPAMLMMLTSFTRIIVVLGILRQALGLQQ
SPPNKVLIGIALVMTIFIMRPVGEEIYEKAFLPYDQGIIELPEAVERGEKPLRQFMLAQTRETDLEQMLKIADEPTTLTA
EEIPFFVLMPAYVLSELKTAFQIGFLLFLPFLVIDLVVASVLMSMGMMMLSPLIISLPFKLMVFVLVDGWSMTVSTLVAS
YG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=236, Percent_Identity=51.6949152542373, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26910; Mature: 26910

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]