| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fliH [C]
Identifier: 157959911
GI number: 157959911
Start: 90681
End: 91436
Strand: Reverse
Name: fliH [C]
Synonym: Spea_0081
Alternate gene names: 157959911
Gene position: 91436-90681 (Counterclockwise)
Preceding gene: 157959912
Following gene: 157959910
Centisome position: 1.77
GC content: 49.47
Gene sequence:
>756_bases ATGACGACTGAAATCAAAAGCTCAGACCCTCGCTGGCGCCTTACTGGTGCCCATGCTCGCCGTCACCGTTTTTCGCCTCT TATCGCTCCCGAAACCGATGCCGAACAAAGTGAAATGAGCTGGCAAGATTTTCAGCAGGCTTTCGATAAAGGCTATGATG ATGGCGTGCAAAAAGGCCATCAAGCCGGCTTTGATGCAGGTGTTGAAGAGGGACGTCAGTCTGGCCATGCCGCAGGATTC AACCAAGGGCGCATTGAAGGTCAGCAAAAAGGTAAAGACAATATCGATGACCAGCTTAATAGTATTATCGCTCCTTTAGG TGCCCTGAAGTCACTACTCGAAGAAGGCCATAGTCAGCAGATAGCGCAGCAGCAAACGCTGATCTTAGATCTCGTTCGCC GAGTATCCTTACAGGTGATCCGCTGCGAACTGACCCTGCAACCACAACAGATCTTAAATTTGGTTGAAGAGACATTAAGC GCGCTACCAGATGATCCAACCGAGGTTAAAATCCATCTTGAACCGAGTGCAGTAGATAAGCTTAAAGAGCTGGCAGCCGA TAAGATTAAGCATTGGACGCTGGTTGCAGACGCCAGTATTAGTGCCGGTGGTTGCCGTATCGTTAGCGCCACCTCAGATG CTGATGCATCGGTAGAGACTCGCCTTAATAGCTGTTTAGCCCAAGTTCAGGCTCACCTTAACGAGACCCCGATAGCGGCA TCTAGCTTAGCAAATGAGGCTGACGTTGAAATTTAA
Upstream 100 bases:
>100_bases AAGCTGTGGCTGCACGTAAAGAGATCATGGAAATCGCCAAACAGATGGCTGATGAAGGCCTGATTGAGTTACAACTGTTT GAAGAGCAGGTGGTTGAATA
Downstream 100 bases:
>100_bases CGCCGACATTTTAGATTGGCCTAAGGTTCCCGTCGCGCAAGTATACGGACGACTCACTCGAGTCAACGGCTTATTACTTG AGGCGGTTGGATGCCAGCTG
Product: flagellar assembly protein H
Products: NA
Alternate protein names: Flagellar Assembly Protein FliH; Flagellar Assembly Protein; Lateral Flagellar Assembly Protein FliH
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTTEIKSSDPRWRLTGAHARRHRFSPLIAPETDAEQSEMSWQDFQQAFDKGYDDGVQKGHQAGFDAGVEEGRQSGHAAGF NQGRIEGQQKGKDNIDDQLNSIIAPLGALKSLLEEGHSQQIAQQQTLILDLVRRVSLQVIRCELTLQPQQILNLVEETLS ALPDDPTEVKIHLEPSAVDKLKELAADKIKHWTLVADASISAGGCRIVSATSDADASVETRLNSCLAQVQAHLNETPIAA SSLANEADVEI
Sequences:
>Translated_251_residues MTTEIKSSDPRWRLTGAHARRHRFSPLIAPETDAEQSEMSWQDFQQAFDKGYDDGVQKGHQAGFDAGVEEGRQSGHAAGF NQGRIEGQQKGKDNIDDQLNSIIAPLGALKSLLEEGHSQQIAQQQTLILDLVRRVSLQVIRCELTLQPQQILNLVEETLS ALPDDPTEVKIHLEPSAVDKLKELAADKIKHWTLVADASISAGGCRIVSATSDADASVETRLNSCLAQVQAHLNETPIAA SSLANEADVEI >Mature_250_residues TTEIKSSDPRWRLTGAHARRHRFSPLIAPETDAEQSEMSWQDFQQAFDKGYDDGVQKGHQAGFDAGVEEGRQSGHAAGFN QGRIEGQQKGKDNIDDQLNSIIAPLGALKSLLEEGHSQQIAQQQTLILDLVRRVSLQVIRCELTLQPQQILNLVEETLSA LPDDPTEVKIHLEPSAVDKLKELAADKIKHWTLVADASISAGGCRIVSATSDADASVETRLNSCLAQVQAHLNETPIAAS SLANEADVEI
Specific function: Needed For Flagellar Regrowth And Assembly. [C]
COG id: COG1317
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27347; Mature: 27216
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEIKSSDPRWRLTGAHARRHRFSPLIAPETDAEQSEMSWQDFQQAFDKGYDDGVQKGH CCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHH QAGFDAGVEEGRQSGHAAGFNQGRIEGQQKGKDNIDDQLNSIIAPLGALKSLLEEGHSQQ HCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH IAQQQTLILDLVRRVSLQVIRCELTLQPQQILNLVEETLSALPDDPTEVKIHLEPSAVDK HHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH LKELAADKIKHWTLVADASISAGGCRIVSATSDADASVETRLNSCLAQVQAHLNETPIAA HHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH SSLANEADVEI HHHCCCCCCCC >Mature Secondary Structure TTEIKSSDPRWRLTGAHARRHRFSPLIAPETDAEQSEMSWQDFQQAFDKGYDDGVQKGH CCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHH QAGFDAGVEEGRQSGHAAGFNQGRIEGQQKGKDNIDDQLNSIIAPLGALKSLLEEGHSQQ HCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH IAQQQTLILDLVRRVSLQVIRCELTLQPQQILNLVEETLSALPDDPTEVKIHLEPSAVDK HHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH LKELAADKIKHWTLVADASISAGGCRIVSATSDADASVETRLNSCLAQVQAHLNETPIAA HHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH SSLANEADVEI HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA