Click here to switch to the map view.

The map label for this gene is flgH [H]

Identifier: 157959899

GI number: 157959899

Start: 82311

End: 82985

Strand: Reverse

Name: flgH [H]

Synonym: Spea_0069

Alternate gene names: 157959899

Gene position: 82985-82311 (Counterclockwise)

Preceding gene: 157959900

Following gene: 157959898

Centisome position: 1.6

GC content: 48.3

Gene sequence:

>675_bases
ATGCAACAACTTCGGATAGGATTTTGGATTGGCTTAGTATTACTCTTATCTGGCTGTATCTCCCATATTCCTGAACTTGA
TACTAAACCAGGAAAACCTGAGTGGGCACCGCCAGAAATAGATTACAGCTTGCCTGACGCCAAAGACGGTAGCGTCTACC
GCCCTGGGTTTATGCTCACACTATTCAAAGATAAGCGTGCATTTCGCGAAGGCGACATTCTTACCGTCGCCCTAGATGAA
AAGACTTACTCGAGTAAAAGTGCTGACACTAAGACCAATAAAAACACGGGCTTGTCGCTTGATGGCCAAGGCACTACAGG
TAACAACAGTATCGCCGGTAGCGGCGAAGCCAACTTAGGTAGCTCTTTTAGCGGCACAGGTTCGAGCACGCAGCAAAACC
AGCTATCAGGCTCAATCACGGTCACCGTGGCTAAAGTTTTACCTAATGGCGCGCTATTAATTCGTGGCGAAAAATGGCTC
AGACTTAACCAAGGCGACGAGTACCTGCGTTTACTCGGGTTGATCCGTACCGACGATATTGGCAACGACAACACCATTTC
ATCTCAGCGTATCGCCGATGCTCGCATTATCTATGGTGGCCAAGGTGCTATTACCGATAGCAACCGTATGGGTTGGGCAT
CACGCTACTTTAATAGCCCTTGGTTCCCGTTATGA

Upstream 100 bases:

>100_bases
AAGTCGTATCGGCCTCTGACGATATGCTTAAGTTCCTAAATCAAGCGCTGTAATCAGCGCTTTTCCCTTGGTTCACATTA
GGACTCGAAAAAGGATCACC

Downstream 100 bases:

>100_bases
TTTTCCGTTTACCGATTCAAGAATCAAGGTTGTTTGAATGAAAAAAATCGCCCTCTTTATCACCAGTATGTTGCTCGCCT
TACTGCCATTGCTTCCCGTT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein 2 [H]

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MQQLRIGFWIGLVLLLSGCISHIPELDTKPGKPEWAPPEIDYSLPDAKDGSVYRPGFMLTLFKDKRAFREGDILTVALDE
KTYSSKSADTKTNKNTGLSLDGQGTTGNNSIAGSGEANLGSSFSGTGSSTQQNQLSGSITVTVAKVLPNGALLIRGEKWL
RLNQGDEYLRLLGLIRTDDIGNDNTISSQRIADARIIYGGQGAITDSNRMGWASRYFNSPWFPL

Sequences:

>Translated_224_residues
MQQLRIGFWIGLVLLLSGCISHIPELDTKPGKPEWAPPEIDYSLPDAKDGSVYRPGFMLTLFKDKRAFREGDILTVALDE
KTYSSKSADTKTNKNTGLSLDGQGTTGNNSIAGSGEANLGSSFSGTGSSTQQNQLSGSITVTVAKVLPNGALLIRGEKWL
RLNQGDEYLRLLGLIRTDDIGNDNTISSQRIADARIIYGGQGAITDSNRMGWASRYFNSPWFPL
>Mature_224_residues
MQQLRIGFWIGLVLLLSGCISHIPELDTKPGKPEWAPPEIDYSLPDAKDGSVYRPGFMLTLFKDKRAFREGDILTVALDE
KTYSSKSADTKTNKNTGLSLDGQGTTGNNSIAGSGEANLGSSFSGTGSSTQQNQLSGSITVTVAKVLPNGALLIRGEKWL
RLNQGDEYLRLLGLIRTDDIGNDNTISSQRIADARIIYGGQGAITDSNRMGWASRYFNSPWFPL

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=218, Percent_Identity=35.7798165137615, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24305; Mature: 24305

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLRIGFWIGLVLLLSGCISHIPELDTKPGKPEWAPPEIDYSLPDAKDGSVYRPGFMLT
CCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEE
LFKDKRAFREGDILTVALDEKTYSSKSADTKTNKNTGLSLDGQGTTGNNSIAGSGEANLG
EECCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
SSFSGTGSSTQQNQLSGSITVTVAKVLPNGALLIRGEKWLRLNQGDEYLRLLGLIRTDDI
CCCCCCCCCCCHHHCCCEEEEEEEEECCCCEEEEECCCEEEECCCHHHHHHHHHHHCCCC
GNDNTISSQRIADARIIYGGQGAITDSNRMGWASRYFNSPWFPL
CCCCCCCCHHCCCEEEEECCCCCEECCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MQQLRIGFWIGLVLLLSGCISHIPELDTKPGKPEWAPPEIDYSLPDAKDGSVYRPGFMLT
CCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEE
LFKDKRAFREGDILTVALDEKTYSSKSADTKTNKNTGLSLDGQGTTGNNSIAGSGEANLG
EECCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
SSFSGTGSSTQQNQLSGSITVTVAKVLPNGALLIRGEKWLRLNQGDEYLRLLGLIRTDDI
CCCCCCCCCCCHHHCCCEEEEEEEEECCCCEEEEECCCEEEECCCHHHHHHHHHHHCCCC
GNDNTISSQRIADARIIYGGQGAITDSNRMGWASRYFNSPWFPL
CCCCCCCCHHCCCEEEEECCCCCEECCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]