| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is flgJ
Identifier: 157959897
GI number: 157959897
Start: 80721
End: 81143
Strand: Reverse
Name: flgJ
Synonym: Spea_0067
Alternate gene names: NA
Gene position: 81143-80721 (Counterclockwise)
Preceding gene: 157959898
Following gene: 157959896
Centisome position: 1.57
GC content: 47.75
Gene sequence:
>423_bases ATGAAATTAGACAACAACCACAGCTATCTTAACCAACTCAACGCTGGCGACTTAATTAAAGCCAACGGCGAGCACGGCGC ATTAAAGCTAGTGAGTCAGCAGTTTGAAGCGCAATTTTTACAAACCGTCTTAAAACAGATGCGCAGCGCTTCAGATGTGA TGGCAGATGAAGATAGCCCCCTATCTTCACAAAATGACGGCATGTACCGTGATTGGCATGATGCAGAGCTTGCCGGCCGC TTGAGTCAGATGCAGAGCACCGGACTTGCTAGCGTGATGACAAAACAATTGTCTTCCGCCCTTAAGTCTAGCCCTGAGAC GGTCGCTTCTAATCAGCATGAAACGGTGAATGTCGCAAATCCCAATACAAGAGCCATGCAACCCGCCTTGATTGTGCCAT TTATTGCTAAGCCGCAAGACTAA
Upstream 100 bases:
>100_bases GTGCAGTCAATAGCCTTGGTGCATCACCCATGGATCTGATGTCAATTCTACAAGCACTAGATGAAGCCGGTGCACTGGAA GCGGAACTGGTGGTCATATA
Downstream 100 bases:
>100_bases TTTCGTGAGGGCCCACTGCGGCCCTCCCCCAAGATAGAAAAGGACACACGATGAGCATGCTCAATATTGGTATGTCAGGG CTTAATGCCAGTATGGCGGC
Product: peptidoglycan hydrolase
Products: NA
Alternate protein names: Flagellar Protein FlgJ; Flagellar Protein; Flagellar Biosynthesis
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSPLSSQNDGMYRDWHDAELAGR LSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVANPNTRAMQPALIVPFIAKPQD
Sequences:
>Translated_140_residues MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSPLSSQNDGMYRDWHDAELAGR LSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVANPNTRAMQPALIVPFIAKPQD >Mature_140_residues MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSPLSSQNDGMYRDWHDAELAGR LSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVANPNTRAMQPALIVPFIAKPQD
Specific function: Unknown
COG id: COG3951
COG function: function code MNO; Rod binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.-
Molecular weight: Translated: 15312; Mature: 15312
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSP CCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LSSQNDGMYRDWHDAELAGRLSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVAN CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECC PNTRAMQPALIVPFIAKPQD CCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSP CCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LSSQNDGMYRDWHDAELAGRLSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVAN CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECC PNTRAMQPALIVPFIAKPQD CCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA