Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is flgJ

Identifier: 157959897

GI number: 157959897

Start: 80721

End: 81143

Strand: Reverse

Name: flgJ

Synonym: Spea_0067

Alternate gene names: NA

Gene position: 81143-80721 (Counterclockwise)

Preceding gene: 157959898

Following gene: 157959896

Centisome position: 1.57

GC content: 47.75

Gene sequence:

>423_bases
ATGAAATTAGACAACAACCACAGCTATCTTAACCAACTCAACGCTGGCGACTTAATTAAAGCCAACGGCGAGCACGGCGC
ATTAAAGCTAGTGAGTCAGCAGTTTGAAGCGCAATTTTTACAAACCGTCTTAAAACAGATGCGCAGCGCTTCAGATGTGA
TGGCAGATGAAGATAGCCCCCTATCTTCACAAAATGACGGCATGTACCGTGATTGGCATGATGCAGAGCTTGCCGGCCGC
TTGAGTCAGATGCAGAGCACCGGACTTGCTAGCGTGATGACAAAACAATTGTCTTCCGCCCTTAAGTCTAGCCCTGAGAC
GGTCGCTTCTAATCAGCATGAAACGGTGAATGTCGCAAATCCCAATACAAGAGCCATGCAACCCGCCTTGATTGTGCCAT
TTATTGCTAAGCCGCAAGACTAA

Upstream 100 bases:

>100_bases
GTGCAGTCAATAGCCTTGGTGCATCACCCATGGATCTGATGTCAATTCTACAAGCACTAGATGAAGCCGGTGCACTGGAA
GCGGAACTGGTGGTCATATA

Downstream 100 bases:

>100_bases
TTTCGTGAGGGCCCACTGCGGCCCTCCCCCAAGATAGAAAAGGACACACGATGAGCATGCTCAATATTGGTATGTCAGGG
CTTAATGCCAGTATGGCGGC

Product: peptidoglycan hydrolase

Products: NA

Alternate protein names: Flagellar Protein FlgJ; Flagellar Protein; Flagellar Biosynthesis

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSPLSSQNDGMYRDWHDAELAGR
LSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVANPNTRAMQPALIVPFIAKPQD

Sequences:

>Translated_140_residues
MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSPLSSQNDGMYRDWHDAELAGR
LSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVANPNTRAMQPALIVPFIAKPQD
>Mature_140_residues
MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSPLSSQNDGMYRDWHDAELAGR
LSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVANPNTRAMQPALIVPFIAKPQD

Specific function: Unknown

COG id: COG3951

COG function: function code MNO; Rod binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.-

Molecular weight: Translated: 15312; Mature: 15312

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSP
CCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LSSQNDGMYRDWHDAELAGRLSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVAN
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECC
PNTRAMQPALIVPFIAKPQD
CCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MKLDNNHSYLNQLNAGDLIKANGEHGALKLVSQQFEAQFLQTVLKQMRSASDVMADEDSP
CCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LSSQNDGMYRDWHDAELAGRLSQMQSTGLASVMTKQLSSALKSSPETVASNQHETVNVAN
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECC
PNTRAMQPALIVPFIAKPQD
CCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA