| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157959875
Identifier: 157959875
GI number: 157959875
Start: 59964
End: 61265
Strand: Reverse
Name: 157959875
Synonym: Spea_0045
Alternate gene names: NA
Gene position: 61265-59964 (Counterclockwise)
Preceding gene: 157959883
Following gene: 157959874
Centisome position: 1.18
GC content: 43.09
Gene sequence:
>1302_bases ATGACTGACCTTTTTCAGCTCAATATACAGATCATTCAGAATAGATGGCCAGACATTGCAGCAGGGTTACTGCAGTGCGA CATCAACCAGCTCAAAGCAAACTTAATAGAAGGGCGTGAGCAAACTATCAGCGTAAACGGATTACAGTTAAGTAGCCGTC ACTACCGCCAGCAAGAAGCTGCGTTACTAGCATCTGACCTAGCAAAGCAAACTGAGAACGTTCATTTATATGGTGTCGGA ATGGGTGATGTTCCTATACACCTACTGCAAGAACACCAAGTGACTCAAATTCACGTCCACCTAATTAACCAAACCGTATT TGCATTATTAATAAGCTATACCGACCAAACGCAATGGCTAACACACCCGAGTATCACGCTCAACATATGCCCAACAAGCC AATTTCCGTTGGAGCCTTACATTGCTAATCCCGCAGAGCTATCCTTATGTGAGTGTAATGGCGAATACTCTTTAATCAGA GACATTATTATAGATGAGCTTAACCGTGAATATGCGAATGACAATGTCGCTAAACGTGTTGCTCAATTTAACGACCGCAT TCAGAATAACCATGTTTTTTTGGATATTGATCAAGACATTAGTGCACTTAAATCCATAGCTAAAAATAAAGAAGCCTTCG TTATTGGTGCTGGACCAAGTTTAGAAGAACACTACAGCTTTCTAGCATCCATCAGCAAACAACCTCTTCACCACCGTCCC ATAATCATCGCCGTTGATGCTGCAGCGAAAGGCCTGCTAGCTCATGGAGTCAAACTGGATATTGTCGTTACGATAGACGA AATGATTGATAGCCACATAGTTGGTACGCACACCGACTCGAGTACCGCATTAGTATACTTTCCAAAAGCAGATCCTGAGT TGCTCAACAACTGGCCAGGGGCACGTTACTGGAGTTTATCAAATAACGACTGTTACAAACTCCTTCATCACTATAACCAC ACCCAGTTATTTACTAATGGTAGCGTTATCCATCCTGCCACCGATTTGGCAGTAAAGCTTAATTGCCAGCATATAACCTT CTTTGGTGCTGATTTTGGCTACCCTAATCAAAAAAGTCATGCCTATTGGCAAGATGGAGCACTTGGAGGACTCAAAGCTG CTCAATCTAGGCACTGGGTGCTTGATGGCCATGGTGAAAAGTTAGCAACTGCTTTAAGTTTCAGGTCATACCTCAGGAGC TTAGAGCTATATATTGCCAATCACCCAGAGGTCTACTTTTACCGCGCAAGTCAGCAAGGAGCATATATTCAAGGCTCCCA ATTTAAAGAGCCGTCACTATGA
Upstream 100 bases:
>100_bases GTTTATTCTACCCGACGAAGATCGGCAACAGCATGTGATATACCTCGCAAAAGCAGGTTAAAAACGATAACTACACGACC ACAAAGATTTTATCAAAACT
Downstream 100 bases:
>100_bases CAACGCAAGAGCTTGTTAATACTTTAATTGAATCAGGACAATTATTTAGAACTGGTAGAGAAGGTAAAGCCAACTCTCTT TATGCCAGCAGTGTAGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTDLFQLNIQIIQNRWPDIAAGLLQCDINQLKANLIEGREQTISVNGLQLSSRHYRQQEAALLASDLAKQTENVHLYGVG MGDVPIHLLQEHQVTQIHVHLINQTVFALLISYTDQTQWLTHPSITLNICPTSQFPLEPYIANPAELSLCECNGEYSLIR DIIIDELNREYANDNVAKRVAQFNDRIQNNHVFLDIDQDISALKSIAKNKEAFVIGAGPSLEEHYSFLASISKQPLHHRP IIIAVDAAAKGLLAHGVKLDIVVTIDEMIDSHIVGTHTDSSTALVYFPKADPELLNNWPGARYWSLSNNDCYKLLHHYNH TQLFTNGSVIHPATDLAVKLNCQHITFFGADFGYPNQKSHAYWQDGALGGLKAAQSRHWVLDGHGEKLATALSFRSYLRS LELYIANHPEVYFYRASQQGAYIQGSQFKEPSL
Sequences:
>Translated_433_residues MTDLFQLNIQIIQNRWPDIAAGLLQCDINQLKANLIEGREQTISVNGLQLSSRHYRQQEAALLASDLAKQTENVHLYGVG MGDVPIHLLQEHQVTQIHVHLINQTVFALLISYTDQTQWLTHPSITLNICPTSQFPLEPYIANPAELSLCECNGEYSLIR DIIIDELNREYANDNVAKRVAQFNDRIQNNHVFLDIDQDISALKSIAKNKEAFVIGAGPSLEEHYSFLASISKQPLHHRP IIIAVDAAAKGLLAHGVKLDIVVTIDEMIDSHIVGTHTDSSTALVYFPKADPELLNNWPGARYWSLSNNDCYKLLHHYNH TQLFTNGSVIHPATDLAVKLNCQHITFFGADFGYPNQKSHAYWQDGALGGLKAAQSRHWVLDGHGEKLATALSFRSYLRS LELYIANHPEVYFYRASQQGAYIQGSQFKEPSL >Mature_432_residues TDLFQLNIQIIQNRWPDIAAGLLQCDINQLKANLIEGREQTISVNGLQLSSRHYRQQEAALLASDLAKQTENVHLYGVGM GDVPIHLLQEHQVTQIHVHLINQTVFALLISYTDQTQWLTHPSITLNICPTSQFPLEPYIANPAELSLCECNGEYSLIRD IIIDELNREYANDNVAKRVAQFNDRIQNNHVFLDIDQDISALKSIAKNKEAFVIGAGPSLEEHYSFLASISKQPLHHRPI IIAVDAAAKGLLAHGVKLDIVVTIDEMIDSHIVGTHTDSSTALVYFPKADPELLNNWPGARYWSLSNNDCYKLLHHYNHT QLFTNGSVIHPATDLAVKLNCQHITFFGADFGYPNQKSHAYWQDGALGGLKAAQSRHWVLDGHGEKLATALSFRSYLRSL ELYIANHPEVYFYRASQQGAYIQGSQFKEPSL
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48651; Mature: 48519
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLFQLNIQIIQNRWPDIAAGLLQCDINQLKANLIEGREQTISVNGLQLSSRHYRQQEA CCCEEEEEEHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECHHHHHHHHH ALLASDLAKQTENVHLYGVGMGDVPIHLLQEHQVTQIHVHLINQTVFALLISYTDQTQWL HHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCEE THPSITLNICPTSQFPLEPYIANPAELSLCECNGEYSLIRDIIIDELNREYANDNVAKRV ECCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHH AQFNDRIQNNHVFLDIDQDISALKSIAKNKEAFVIGAGPSLEEHYSFLASISKQPLHHRP HHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCC IIIAVDAAAKGLLAHGVKLDIVVTIDEMIDSHIVGTHTDSSTALVYFPKADPELLNNWPG EEEEECCHHCCHHHCCCEEEEEEEEHHHHCCCEEEECCCCCEEEEEECCCCHHHHHCCCC ARYWSLSNNDCYKLLHHYNHTQLFTNGSVIHPATDLAVKLNCQHITFFGADFGYPNQKSH CEEEECCCCHHHHHHHHCCCEEEEECCCEECCCCCEEEEEEEEEEEEEECCCCCCCCCCC AYWQDGALGGLKAAQSRHWVLDGHGEKLATALSFRSYLRSLELYIANHPEVYFYRASQQG CEECCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCC AYIQGSQFKEPSL CEEECCCCCCCCC >Mature Secondary Structure TDLFQLNIQIIQNRWPDIAAGLLQCDINQLKANLIEGREQTISVNGLQLSSRHYRQQEA CCEEEEEEHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECHHHHHHHHH ALLASDLAKQTENVHLYGVGMGDVPIHLLQEHQVTQIHVHLINQTVFALLISYTDQTQWL HHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCEE THPSITLNICPTSQFPLEPYIANPAELSLCECNGEYSLIRDIIIDELNREYANDNVAKRV ECCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHH AQFNDRIQNNHVFLDIDQDISALKSIAKNKEAFVIGAGPSLEEHYSFLASISKQPLHHRP HHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCC IIIAVDAAAKGLLAHGVKLDIVVTIDEMIDSHIVGTHTDSSTALVYFPKADPELLNNWPG EEEEECCHHCCHHHCCCEEEEEEEEHHHHCCCEEEECCCCCEEEEEECCCCHHHHHCCCC ARYWSLSNNDCYKLLHHYNHTQLFTNGSVIHPATDLAVKLNCQHITFFGADFGYPNQKSH CEEEECCCCHHHHHHHHCCCEEEEECCCEECCCCCEEEEEEEEEEEEEECCCCCCCCCCC AYWQDGALGGLKAAQSRHWVLDGHGEKLATALSFRSYLRSLELYIANHPEVYFYRASQQG CEECCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCC AYIQGSQFKEPSL CEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA