| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is smg [H]
Identifier: 157959864
GI number: 157959864
Start: 37511
End: 37984
Strand: Direct
Name: smg [H]
Synonym: Spea_0034
Alternate gene names: 157959864
Gene position: 37511-37984 (Clockwise)
Preceding gene: 157959863
Following gene: 157959866
Centisome position: 0.72
GC content: 41.77
Gene sequence:
>474_bases ATGTTTGATATCCTCATGTATTTGTTTGAAAACTATGTGCATAGTGAAGTCGAATTATTAGTAGATGAAGACGAACTCAC GAAAGAACTGACTCGCGCTGGATTTCATCAAAGTGAAATCATTAAGGCACTCTCCTGGTTAGAGCGGTTAGCTGACCTAC AGGAAGCGGGTACGCCTTATCTCTGCAATCATGATCAGCAATCATTCCGTATTTACACTAAAGCCGAGATGGAAAAAATT GACGTCGAGAGTCGTGGTTTTTTACTGTTTTTAGAGCAGATTAAAGTGCTCAGTGTAGAGATCCGCGAAATGGTCATTGA CCGAGTGATGGAAATTGATGAGCCGACCTTGAACCTTGATGATATTAAATGGGTTATCTTGATGGTGCTATTTAATGCTC CGGGTCATGAATCTGCCTACGAGCAGATGGAAGATCTTATCTTTGAGCAACCCGATGGCCGCTTACACTCATAA
Upstream 100 bases:
>100_bases AAACCATAGAGCTAGTATTGGAGCAATTGCTTGAACTCGAGCTGCAGGGTTGGATTTCTGCAGTCCCTGGTGGTTACATA AGACTAAAGAGGAGCTAGCC
Downstream 100 bases:
>100_bases TGAGCGACATGAATAAAAGAAAGGAGGCCTAAGCCTCCTTTTTTGTGTCCGGAACACTTATGCCAATTTACCATGGATGG AGCCAAATTGGCTTTGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MFDILMYLFENYVHSEVELLVDEDELTKELTRAGFHQSEIIKALSWLERLADLQEAGTPYLCNHDQQSFRIYTKAEMEKI DVESRGFLLFLEQIKVLSVEIREMVIDRVMEIDEPTLNLDDIKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS
Sequences:
>Translated_157_residues MFDILMYLFENYVHSEVELLVDEDELTKELTRAGFHQSEIIKALSWLERLADLQEAGTPYLCNHDQQSFRIYTKAEMEKI DVESRGFLLFLEQIKVLSVEIREMVIDRVMEIDEPTLNLDDIKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS >Mature_157_residues MFDILMYLFENYVHSEVELLVDEDELTKELTRAGFHQSEIIKALSWLERLADLQEAGTPYLCNHDQQSFRIYTKAEMEKI DVESRGFLLFLEQIKVLSVEIREMVIDRVMEIDEPTLNLDDIKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS
Specific function: Unknown
COG id: COG2922
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the smg family [H]
Homologues:
Organism=Escherichia coli, GI1789679, Length=157, Percent_Identity=58.5987261146497, Blast_Score=184, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007456 [H]
Pfam domain/function: PF04361 DUF494 [H]
EC number: NA
Molecular weight: Translated: 18498; Mature: 18498
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDILMYLFENYVHSEVELLVDEDELTKELTRAGFHQSEIIKALSWLERLADLQEAGTPY CHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC LCNHDQQSFRIYTKAEMEKIDVESRGFLLFLEQIKVLSVEIREMVIDRVMEIDEPTLNLD EECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DIKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFDILMYLFENYVHSEVELLVDEDELTKELTRAGFHQSEIIKALSWLERLADLQEAGTPY CHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC LCNHDQQSFRIYTKAEMEKIDVESRGFLLFLEQIKVLSVEIREMVIDRVMEIDEPTLNLD EECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DIKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA