| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157959841
Identifier: 157959841
GI number: 157959841
Start: 15705
End: 16142
Strand: Reverse
Name: 157959841
Synonym: Spea_0011
Alternate gene names: NA
Gene position: 16142-15705 (Counterclockwise)
Preceding gene: 157959842
Following gene: 157959840
Centisome position: 0.31
GC content: 42.47
Gene sequence:
>438_bases ATGGCATCACTTATTGGCATTGCATTTAAAACTGAAAAACGTGGTCAAATGATTACGGTTGAACAAGCCGAAGTTACCCA AGCTAAAGGTGTTGAAAACGACATCTTTGGCCGTCCGGGGAAACGCCAAATCACCGTGATGTCTATTCAGAAATGGCGGC TAGCCTGTAATGAAATCGACAATCAACTCCCTTGGCTTACTCGCCGAGCAAACTTACTTATTGATGGCTTAAGTTTTTCC TCACAAGATGTAGGTAAGCAACTTATTATCGGCAAACTCATTTTAGAGATCACTGGTGAAACTGATCCCTGCGAAAAAAT GGAAATGGCTTACCCTGGACTCGAGCAAGCATTAATGTCTGACTGGCGCGGTGGCGTAACTTGTCGAGTGATTACAGGTT CAAATATCAAAATAGACGACAATGTTGAATTGCTATAG
Upstream 100 bases:
>100_bases CACACCTTAATTGCCAGCCAAACAGAATCGACGCCTTATCAGTACTTGATAAAAAAAGGCTTATAGTCGCCTGCCCAGAT AATGGATAAAAGGAATTACC
Downstream 100 bases:
>100_bases CCACTATTTTATTCATAATTATAGCCATCTCTCTTACCTTTGATTCAGACTGCTCAGCAATTAAATAACTTATAGCCTGC AAACTCGCTAGCAACCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: MOSC Domain Containing Protein
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MASLIGIAFKTEKRGQMITVEQAEVTQAKGVENDIFGRPGKRQITVMSIQKWRLACNEIDNQLPWLTRRANLLIDGLSFS SQDVGKQLIIGKLILEITGETDPCEKMEMAYPGLEQALMSDWRGGVTCRVITGSNIKIDDNVELL
Sequences:
>Translated_145_residues MASLIGIAFKTEKRGQMITVEQAEVTQAKGVENDIFGRPGKRQITVMSIQKWRLACNEIDNQLPWLTRRANLLIDGLSFS SQDVGKQLIIGKLILEITGETDPCEKMEMAYPGLEQALMSDWRGGVTCRVITGSNIKIDDNVELL >Mature_144_residues ASLIGIAFKTEKRGQMITVEQAEVTQAKGVENDIFGRPGKRQITVMSIQKWRLACNEIDNQLPWLTRRANLLIDGLSFSS QDVGKQLIIGKLILEITGETDPCEKMEMAYPGLEQALMSDWRGGVTCRVITGSNIKIDDNVELL
Specific function: Unknown
COG id: COG2258
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16153; Mature: 16022
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLIGIAFKTEKRGQMITVEQAEVTQAKGVENDIFGRPGKRQITVMSIQKWRLACNEID CCCEEEEEEEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHC NQLPWLTRRANLLIDGLSFSSQDVGKQLIIGKLILEITGETDPCEKMEMAYPGLEQALMS CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCHHHHHHH DWRGGVTCRVITGSNIKIDDNVELL HCCCCEEEEEEECCCEEECCCEEEC >Mature Secondary Structure ASLIGIAFKTEKRGQMITVEQAEVTQAKGVENDIFGRPGKRQITVMSIQKWRLACNEID CCEEEEEEEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHC NQLPWLTRRANLLIDGLSFSSQDVGKQLIIGKLILEITGETDPCEKMEMAYPGLEQALMS CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCHHHHHHH DWRGGVTCRVITGSNIKIDDNVELL HCCCCEEEEEEECCCEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA