| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826358
Identifier: 157826358
GI number: 157826358
Start: 1210485
End: 1211567
Strand: Direct
Name: 157826358
Synonym: A1C_06735
Alternate gene names: NA
Gene position: 1210485-1211567 (Clockwise)
Preceding gene: 157826357
Following gene: 157826360
Centisome position: 98.33
GC content: 26.32
Gene sequence:
>1083_bases ATGCTGCTATATCGAAAATACTTTATAAAAAATATCTTACCGCTGCTTATAGTAGTTACTTTTTCATTGACTAGTATAGT ATGGATAACACAAATATTAAAACTTTTATACTTATTTGATAAAGGTATAAAAGTTATGGATTTCTTCAATTTAATAGTTC TAGTGCTTCCTACTTTATTATTTATTCTGTTACCAGTAATAACGGTTATTGCAATCATCTATATCTATAATAATTTAAAA GTCGAGCGACAATTAATTATATTACAAGCTTCGGGAGTTAATAATGTACAGTTAGCATTGCCTGCTTTATATGTCGCATT AATAGTTATGCTACTTGCTTATTATATATCTTCTACCATCATGCCGTTATCTCATATAAACTTAAAATCACATTTAAACT TTATAAAGAATAATTATATCTCAAGTATGATTGAAGAGAAAACTTTTAATAAAGTAACGAAAGATATCACTGTTTTTATA GATAAAAAATCAGCAGGAAATATTATGAACGGAGTAATAATATTTGATAATCGCAATGCTGATAATCCATCAGTAGTATT TGCTGGTTCAGGTACTCTTAATATATATGATAACAACCCGATTTTTGAACTTAATAAAGGTCTAAGACAAGAATATGACG TAAACGGTAATTTAACTCAACTAACTTTTGATTCTTTAATGATAAAGCTACAAAATGATAATCATTTAGCATCACAAAGA ACTCAACATAATAAAGAAGCAAACGAATATTATATAAGCGAATTACTCGCCCCTACTCATGATTTAGTTATTACTAAAAA AATTAAATTAATTGCTGAAGCACATCAAAGAATAATTTGGCCTTTATATAATTTTGTATTACCTTTTTTAGCACTTGCAG TTTTTCTAAGATATCCTTATAGCAAAAAAACAACTTTTATGCCAGTATTATTTTCTACCTTAACAGTATTGCTAGTTACT TCAATTCATTTTATATTGCAAAATTTTGCTTCAAAAAATCTAGATTTTATTTTTGCTTGTTACTCCAATTTGGTTATTGC TTTAACGATCGGATTATATTTATTTGTACGTAAAAGAATATAA
Upstream 100 bases:
>100_bases CCACGACTTGATCGCGGAATCCGTTAAAAATATTAGTATTTTTTATTATTTTTATTGGTACCGTGGTCAAGCCACGGTAT GACAAATTTGGAACAAATCT
Downstream 100 bases:
>100_bases ATCTATTCTACCTTATTCCACGTTCCACGAAGATTTTGAGTAAAACAATCGATTTTATTTTCCTGCTCGGTAAATTTATT TATTTTAACTGTTAATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MLLYRKYFIKNILPLLIVVTFSLTSIVWITQILKLLYLFDKGIKVMDFFNLIVLVLPTLLFILLPVITVIAIIYIYNNLK VERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTIMPLSHINLKSHLNFIKNNYISSMIEEKTFNKVTKDITVFI DKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNNPIFELNKGLRQEYDVNGNLTQLTFDSLMIKLQNDNHLASQR TQHNKEANEYYISELLAPTHDLVITKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLRYPYSKKTTFMPVLFSTLTVLLVT SIHFILQNFASKNLDFIFACYSNLVIALTIGLYLFVRKRI
Sequences:
>Translated_360_residues MLLYRKYFIKNILPLLIVVTFSLTSIVWITQILKLLYLFDKGIKVMDFFNLIVLVLPTLLFILLPVITVIAIIYIYNNLK VERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTIMPLSHINLKSHLNFIKNNYISSMIEEKTFNKVTKDITVFI DKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNNPIFELNKGLRQEYDVNGNLTQLTFDSLMIKLQNDNHLASQR TQHNKEANEYYISELLAPTHDLVITKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLRYPYSKKTTFMPVLFSTLTVLLVT SIHFILQNFASKNLDFIFACYSNLVIALTIGLYLFVRKRI >Mature_360_residues MLLYRKYFIKNILPLLIVVTFSLTSIVWITQILKLLYLFDKGIKVMDFFNLIVLVLPTLLFILLPVITVIAIIYIYNNLK VERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTIMPLSHINLKSHLNFIKNNYISSMIEEKTFNKVTKDITVFI DKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNNPIFELNKGLRQEYDVNGNLTQLTFDSLMIKLQNDNHLASQR TQHNKEANEYYISELLAPTHDLVITKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLRYPYSKKTTFMPVLFSTLTVLLVT SIHFILQNFASKNLDFIFACYSNLVIALTIGLYLFVRKRI
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 41329; Mature: 41329
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLYRKYFIKNILPLLIVVTFSLTSIVWITQILKLLYLFDKGIKVMDFFNLIVLVLPTLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FILLPVITVIAIIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTI HHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC MPLSHINLKSHLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNA CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEECCCC DNPSVVFAGSGTLNIYDNNPIFELNKGLRQEYDVNGNLTQLTFDSLMIKLQNDNHLASQR CCCCEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEHHHEEEEECCCCCHHHHH TQHNKEANEYYISELLAPTHDLVITKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLRYPY HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SKKTTFMPVLFSTLTVLLVTSIHFILQNFASKNLDFIFACYSNLVIALTIGLYLFVRKRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLYRKYFIKNILPLLIVVTFSLTSIVWITQILKLLYLFDKGIKVMDFFNLIVLVLPTLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FILLPVITVIAIIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTI HHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC MPLSHINLKSHLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNA CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEECCCC DNPSVVFAGSGTLNIYDNNPIFELNKGLRQEYDVNGNLTQLTFDSLMIKLQNDNHLASQR CCCCEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEHHHEEEEECCCCCHHHHH TQHNKEANEYYISELLAPTHDLVITKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLRYPY HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SKKTTFMPVLFSTLTVLLVTSIHFILQNFASKNLDFIFACYSNLVIALTIGLYLFVRKRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]