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The map label for this gene is omp [H]

Identifier: 157826301

GI number: 157826301

Start: 1155248

End: 1155727

Strand: Direct

Name: omp [H]

Synonym: A1C_06450

Alternate gene names: 157826301

Gene position: 1155248-1155727 (Clockwise)

Preceding gene: 157826294

Following gene: 157826302

Centisome position: 93.84

GC content: 43.96

Gene sequence:

>480_bases
ATGAAACTATTATCTAAAATTATGATTATAGCTCTTGCAGCTTCTATGGTACAAGCCTGTAACGGTCCGGGCGGTATGAA
TAAACAAGGTACAGGAACACTTCTTGGCGGTGCCGGCGGTGCATTACTTGGTTCTCAATTCGGTAAGGGAAAAGGAAATC
TTGTCGGAGTAGGTGTAGGTGCATTACTTGGAGCAGTGCTTGGTGGACAAATAGGTGCAGGTATGGATGAGCAGGATAGA
AGACTTGCAGAGCTCACCTCTCAAAGAGCTTTAGAATCAGCTCCTAGCGGTAGTAACGTAGAGTGGCGTAATACGGATAA
CGGCAATTACGGTTACGTAACACCTAATAAAACTTATAGAAATAGCAATGGTCAGTATTGCCGTGAGTACACTCAAACAG
TTGTAATAGGCGGAAAACAACAAAAAGCATACGGTAATGCATGCCGCCAACCTGACGGACAATGGCAAGTTGTGAACTAA

Upstream 100 bases:

>100_bases
AGTTTAACAAAGAAAGTATAAAATTCAATGAGTTTTATACTTTACAAAATTCTAAAAACCATATACTTATTAAATGATAT
ATTAATTTAGAGAGAATTAT

Downstream 100 bases:

>100_bases
AGTGTCATACCGAAAAGTACCATATTTCATTCCCACGCAAGCGGGAATCCAGAAAAACGTGAAATTATCTTGAGCTTTTA
ATTTAAGAATTTAGTGTGTT

Product: 17 kD surface antigen precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKLLSKIMIIALAASMVQACNGPGGMNKQGTGTLLGGAGGALLGSQFGKGKGNLVGVGVGALLGAVLGGQIGAGMDEQDR
RLAELTSQRALESAPSGSNVEWRNTDNGNYGYVTPNKTYRNSNGQYCREYTQTVVIGGKQQKAYGNACRQPDGQWQVVN

Sequences:

>Translated_159_residues
MKLLSKIMIIALAASMVQACNGPGGMNKQGTGTLLGGAGGALLGSQFGKGKGNLVGVGVGALLGAVLGGQIGAGMDEQDR
RLAELTSQRALESAPSGSNVEWRNTDNGNYGYVTPNKTYRNSNGQYCREYTQTVVIGGKQQKAYGNACRQPDGQWQVVN
>Mature_159_residues
MKLLSKIMIIALAASMVQACNGPGGMNKQGTGTLLGGAGGALLGSQFGKGKGNLVGVGVGALLGAVLGGQIGAGMDEQDR
RLAELTSQRALESAPSGSNVEWRNTDNGNYGYVTPNKTYRNSNGQYCREYTQTVVIGGKQQKAYGNACRQPDGQWQVVN

Specific function: Unknown

COG id: COG4520

COG function: function code M; Surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rickettsiale 17 kDa surface antigen family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816
- InterPro:   IPR016364 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 16526; Mature: 16526

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLSKIMIIALAASMVQACNGPGGMNKQGTGTLLGGAGGALLGSQFGKGKGNLVGVGVG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCCCEEEECHH
ALLGAVLGGQIGAGMDEQDRRLAELTSQRALESAPSGSNVEWRNTDNGNYGYVTPNKTYR
HHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCEE
NSNGQYCREYTQTVVIGGKQQKAYGNACRQPDGQWQVVN
CCCCHHHHHHHHEEEECCCCCCHHHHHHCCCCCCEEECC
>Mature Secondary Structure
MKLLSKIMIIALAASMVQACNGPGGMNKQGTGTLLGGAGGALLGSQFGKGKGNLVGVGVG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCCCEEEECHH
ALLGAVLGGQIGAGMDEQDRRLAELTSQRALESAPSGSNVEWRNTDNGNYGYVTPNKTYR
HHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCEE
NSNGQYCREYTQTVVIGGKQQKAYGNACRQPDGQWQVVN
CCCCHHHHHHHHEEEECCCCCCHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2768201; 11557893 [H]