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The map label for this gene is 157826296

Identifier: 157826296

GI number: 157826296

Start: 1151697

End: 1152371

Strand: Reverse

Name: 157826296

Synonym: A1C_06425

Alternate gene names: NA

Gene position: 1152371-1151697 (Counterclockwise)

Preceding gene: 157826297

Following gene: 157826295

Centisome position: 93.61

GC content: 34.96

Gene sequence:

>675_bases
ATGAAAAAGTTACTTTTAATAGCTACTACAAGTGCAACAATTTTATCTTCTAGTATATCATTTGCCGATGACATGGGTAA
TGAGTGGTATTTAAGAGTGGATGCCGGTGCAGCAATGTTTAATAAAGAACAAGATAAGGCAACCAGTGTTAAATTAAAAT
CTAATACGACTGTTCCGGTTGATTTAGGTATAGGTTATTATATTTTTGAAAATTTTAGAGCCGATTTAACATTAGGTACT
ATAATAGGTGGAAAGTTGAAGGCATCCGGATCTGCAACTCATGCACCTTTTACCGGTACTAACGTTTCAGTGAGCCATAA
ACCTACTATTACACGTTTACTTATTAACGGTTATGTAGATTTAACTAATTTTGATCTGTTTGATGTTTTTGCCGGTGCCG
GTGTTGGTCCTGCATTAGTTAAAGAGAAAATTACATATAATGGTATAACAGGTCTTTCATCTAACACTAAAAACAGAACT
AATATCTCTTACAGGCTAACTTTAGGTACTTCTGCACAAATTGCCGACGGTGTTAAAGCAGAGCTAGCTTATAGCTGGAT
ATATGACGGTAGAACAAAAAGTAAGAATGTAATTTACCAAGGAACAAGTGTACTAACCGGTGGCATGCGTTATCAAAGTC
ACAACTTAACGGCTGGTATAAGATTTGATATATAA

Upstream 100 bases:

>100_bases
GAATCTAATTACAGATTAAATATAGAACTAAAAAATATGATATGTTATATATTATGCCATTAATAGATAATGTTTAATTA
GTTAATTTGAGGTGCTAACC

Downstream 100 bases:

>100_bases
TTAACAAGAATATATTAATAGTTTTAGGTAATAGACCAATGTCATATCGTGGCTTGGCTACGGTCTCTAGTAGTACACAA
AAAGACTAGACTCTCTGGTC

Product: putative outer surface protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKKLLLIATTSATILSSSISFADDMGNEWYLRVDAGAAMFNKEQDKATSVKLKSNTTVPVDLGIGYYIFENFRADLTLGT
IIGGKLKASGSATHAPFTGTNVSVSHKPTITRLLINGYVDLTNFDLFDVFAGAGVGPALVKEKITYNGITGLSSNTKNRT
NISYRLTLGTSAQIADGVKAELAYSWIYDGRTKSKNVIYQGTSVLTGGMRYQSHNLTAGIRFDI

Sequences:

>Translated_224_residues
MKKLLLIATTSATILSSSISFADDMGNEWYLRVDAGAAMFNKEQDKATSVKLKSNTTVPVDLGIGYYIFENFRADLTLGT
IIGGKLKASGSATHAPFTGTNVSVSHKPTITRLLINGYVDLTNFDLFDVFAGAGVGPALVKEKITYNGITGLSSNTKNRT
NISYRLTLGTSAQIADGVKAELAYSWIYDGRTKSKNVIYQGTSVLTGGMRYQSHNLTAGIRFDI
>Mature_224_residues
MKKLLLIATTSATILSSSISFADDMGNEWYLRVDAGAAMFNKEQDKATSVKLKSNTTVPVDLGIGYYIFENFRADLTLGT
IIGGKLKASGSATHAPFTGTNVSVSHKPTITRLLINGYVDLTNFDLFDVFAGAGVGPALVKEKITYNGITGLSSNTKNRT
NISYRLTLGTSAQIADGVKAELAYSWIYDGRTKSKNVIYQGTSVLTGGMRYQSHNLTAGIRFDI

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y6425_RICAH (A8GQ33)

Other databases:

- EMBL:   CP000847
- RefSeq:   YP_001494016.1
- ProteinModelPortal:   A8GQ33
- STRING:   A8GQ33
- GeneID:   5645179
- GenomeReviews:   CP000847_GR
- KEGG:   rak:A1C_06425
- NMPDR:   fig|293614.3.peg.1213
- eggNOG:   COG3637
- HOGENOM:   HBG664000
- OMA:   ELAYSWI
- ProtClustDB:   CLSK871099
- BioCyc:   RAKA293614:A1C_06425-MONOMER
- InterPro:   IPR011250
- InterPro:   IPR000498
- Gene3D:   G3DSA:2.40.160.20

Pfam domain/function: PF01389 OmpA_membrane

EC number: NA

Molecular weight: Translated: 24142; Mature: 24142

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLIATTSATILSSSISFADDMGNEWYLRVDAGAAMFNKEQDKATSVKLKSNTTVPV
CCEEEEEEECCHHHHHCCCCHHHHCCCEEEEEEECCCEECCCCCCCEEEEEEECCCEEEE
DLGIGYYIFENFRADLTLGTIIGGKLKASGSATHAPFTGTNVSVSHKPTITRLLINGYVD
ECCCCEEEEECCCCCEEEEEEECCEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECEEE
LTNFDLFDVFAGAGVGPALVKEKITYNGITGLSSNTKNRTNISYRLTLGTSAQIADGVKA
ECCCCHHHHHHCCCCCHHHHHHEEEECCEECCCCCCCCCCEEEEEEEECCCCHHCCCCEE
ELAYSWIYDGRTKSKNVIYQGTSVLTGGMRYQSHNLTAGIRFDI
EEEEEEEECCCCCCCEEEEECCEEEECCEEEECCCCEEEEEECC
>Mature Secondary Structure
MKKLLLIATTSATILSSSISFADDMGNEWYLRVDAGAAMFNKEQDKATSVKLKSNTTVPV
CCEEEEEEECCHHHHHCCCCHHHHCCCEEEEEEECCCEECCCCCCCEEEEEEECCCEEEE
DLGIGYYIFENFRADLTLGTIIGGKLKASGSATHAPFTGTNVSVSHKPTITRLLINGYVD
ECCCCEEEEECCCCCEEEEEEECCEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECEEE
LTNFDLFDVFAGAGVGPALVKEKITYNGITGLSSNTKNRTNISYRLTLGTSAQIADGVKA
ECCCCHHHHHHCCCCCHHHHHHEEEECCEECCCCCCCCCCEEEEEEEECCCCHHCCCCEE
ELAYSWIYDGRTKSKNVIYQGTSVLTGGMRYQSHNLTAGIRFDI
EEEEEEEECCCCCCCEEEEECCEEEECCEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA