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The map label for this gene is ompA [H]

Identifier: 157826286

GI number: 157826286

Start: 1141500

End: 1142210

Strand: Reverse

Name: ompA [H]

Synonym: A1C_06365

Alternate gene names: 157826286

Gene position: 1142210-1141500 (Counterclockwise)

Preceding gene: 157826287

Following gene: 157826285

Centisome position: 92.78

GC content: 39.38

Gene sequence:

>711_bases
ATGTTAAAAGTAGGTGCCGGGGCTGTAAGCATAACCCAAGGCGGTAATGCTAGCATCACTGAAATCCAAGGTAACGGTAC
TGCACTCTTCACATTACCTGCAAACTTTAACTTAACAGGCAGCATAAATAAAACCGGTGGTCAGGCTCTGAAGTTAAACT
TCACGAATGGCGGCAGTGTTAGTGGTGTTGTAGGGACTGTGGCTAATTCGGTGGGTGATATCACAACGGCAGGCATAATA
AACTTTGCAAGCAGTGTTAATGCAAAAGGTACGGCGACGCTCTGCGGTACTACAAGTTTTGCCGATACATTTACTAACAC
TGGTGCAGTTACTTTAGCTAAAGCTTCTATCACTAATTTTGCTAAAAATGTAACGGCTACCAGCTTTGCAGTTAACAATG
CTACTATTAATTTCGGTAATAGCCTAGCTTTTAATAGTAATATAACAGGTAGCGGTACTACACTTACTTTAGGTGCAAGC
CAAATAACATATACCGGTACCGGTAGCTTTACCGATACACTAACCTTAAATACTACTTTTGATGGTGCAGATAAGTTAGA
CGGTAATATCTTAATTAAATCAGGTAGTACTCTTGATTTATCAGGAGTTTCAACTTTAGAACTTGTTGTTACTGCTACTA
ATTTTGACATTAATAATATAAGCCCGGATACAAAATATACGGTAATATCTTCAGAAACAGCAGGCGGATGA

Upstream 100 bases:

>100_bases
ACTTGGTGCAAATAAAAATATAACCGGTAGTATTACAAGCAGTAACAGAGTTAATGGTACAATCATCGCAACTGTTGCAA
GTACTATTAATAATATTGCT

Downstream 100 bases:

>100_bases
AAGCCTACTCCCGCAGGTAATGTTAAAGTAACCGTTAATAATTACAACCGCTTTGTCAACTTTACTTTTGATGAATCGAC
TTTGACGTTATTTGCAGAGG

Product: 190-kDa cell surface antigen

Products: NA

Alternate protein names: 190 kDa antigen; Cell surface antigen; rOmp A; rOmpA; 120 kDa outer membrane protein OmpA [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MLKVGAGAVSITQGGNASITEIQGNGTALFTLPANFNLTGSINKTGGQALKLNFTNGGSVSGVVGTVANSVGDITTAGII
NFASSVNAKGTATLCGTTSFADTFTNTGAVTLAKASITNFAKNVTATSFAVNNATINFGNSLAFNSNITGSGTTLTLGAS
QITYTGTGSFTDTLTLNTTFDGADKLDGNILIKSGSTLDLSGVSTLELVVTATNFDINNISPDTKYTVISSETAGG

Sequences:

>Translated_236_residues
MLKVGAGAVSITQGGNASITEIQGNGTALFTLPANFNLTGSINKTGGQALKLNFTNGGSVSGVVGTVANSVGDITTAGII
NFASSVNAKGTATLCGTTSFADTFTNTGAVTLAKASITNFAKNVTATSFAVNNATINFGNSLAFNSNITGSGTTLTLGAS
QITYTGTGSFTDTLTLNTTFDGADKLDGNILIKSGSTLDLSGVSTLELVVTATNFDINNISPDTKYTVISSETAGG
>Mature_236_residues
MLKVGAGAVSITQGGNASITEIQGNGTALFTLPANFNLTGSINKTGGQALKLNFTNGGSVSGVVGTVANSVGDITTAGII
NFASSVNAKGTATLCGTTSFADTFTNTGAVTLAKASITNFAKNVTATSFAVNNATINFGNSLAFNSNITGSGTTLTLGAS
QITYTGTGSFTDTLTLNTTFDGADKLDGNILIKSGSTLDLSGVSTLELVVTATNFDINNISPDTKYTVISSETAGG

Specific function: Elicits protective immunity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: 32 kDa beta peptide:Cell outer membrane; Multi-pass membrane protein (Potential). Note=The cleaved C- terminal fragment (autotransporter domain) is localized in the outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315 [H]

Pfam domain/function: PF03797 Autotransporter [H]

EC number: NA

Molecular weight: Translated: 23527; Mature: 23527

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVGAGAVSITQGGNASITEIQGNGTALFTLPANFNLTGSINKTGGQALKLNFTNGGSV
CEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCC
SGVVGTVANSVGDITTAGIINFASSVNAKGTATLCGTTSFADTFTNTGAVTLAKASITNF
CHHHHHHHHHCCCEEHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCEEEEEEHHHHHH
AKNVTATSFAVNNATINFGNSLAFNSNITGSGTTLTLGASQITYTGTGSFTDTLTLNTTF
HHCCEEEEEEEECEEEECCCEEEECCCCCCCCCEEEEECCEEEEECCCCCEEEEEEEEEE
DGADKLDGNILIKSGSTLDLSGVSTLELVVTATNFDINNISPDTKYTVISSETAGG
CCCCCCCCEEEEECCCEEEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MLKVGAGAVSITQGGNASITEIQGNGTALFTLPANFNLTGSINKTGGQALKLNFTNGGSV
CEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCC
SGVVGTVANSVGDITTAGIINFASSVNAKGTATLCGTTSFADTFTNTGAVTLAKASITNF
CHHHHHHHHHCCCEEHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCEEEEEEHHHHHH
AKNVTATSFAVNNATINFGNSLAFNSNITGSGTTLTLGASQITYTGTGSFTDTLTLNTTF
HHCCEEEEEEEECEEEECCCEEEECCCCCCCCCEEEEECCEEEEECCCCCEEEEEEEEEE
DGADKLDGNILIKSGSTLDLSGVSTLELVVTATNFDINNISPDTKYTVISSETAGG
CCCCCCCCEEEEECCCEEEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8125327; 11557893; 8862558 [H]