| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is nuoI [H]
Identifier: 157826248
GI number: 157826248
Start: 1102527
End: 1103006
Strand: Reverse
Name: nuoI [H]
Synonym: A1C_06135
Alternate gene names: 157826248
Gene position: 1103006-1102527 (Counterclockwise)
Preceding gene: 157826250
Following gene: 157826232
Centisome position: 89.6
GC content: 39.58
Gene sequence:
>480_bases ATGATAAACTATTTAAAATCATTTTTTCTATATGAGATAATAAGGGGAATGTCTTTGACCTTAAAGTATTTCTTTAAGCC CAAAGTTACCATAAATTATCCTTATGAAAAAAGCCATGTTAGCCCTAGATTTAAGGGTGAGCATGCACTGCGTCGCTATG AAAGCGGGGAAGAGCGTTGTATTGCTTGTAAGCTTTGCGAGGCGATTTGTCCGGCACAAGCAATAGTAATTGAAGCGGAC GAACGAGAAGACGGCAGTAGGCGTACAACACGTTATGATATAGACATGACAAAATGCATTTATTGTGGGTTGTGTCAAGA AGCTTGCCCAGTAGATGCGATAGTTGAAGGTCCTAATTTTGAGTTTGCAAGCCTAACTCATGCCGCACTTATTTATGATA AAGAAAGATTACTGCAAAACGGCGATAGATGGGAGCAGGCACTCGCTAGTAAGCTACATAAGGATTATGAGTATAGGTAA
Upstream 100 bases:
>100_bases AACGATCTATGGCTTTGTTGCTGCTTCTATGTCATTCCTGCGTAGGCGGGAATGACATAGAAGCTGCAACAAAGCCATAG ATCGTTAATATATATTTTTT
Downstream 100 bases:
>100_bases ATTGCTATATTACTGGATAGTTTTTACTCTATGTCATTCCTGCGCAAGCAGGAATTCAGCATAAAGTGAGATAAAGCTCT CTTAATTGTAAATAATTATA
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MINYLKSFFLYEIIRGMSLTLKYFFKPKVTINYPYEKSHVSPRFKGEHALRRYESGEERCIACKLCEAICPAQAIVIEAD EREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEFASLTHAALIYDKERLLQNGDRWEQALASKLHKDYEYR
Sequences:
>Translated_159_residues MINYLKSFFLYEIIRGMSLTLKYFFKPKVTINYPYEKSHVSPRFKGEHALRRYESGEERCIACKLCEAICPAQAIVIEAD EREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEFASLTHAALIYDKERLLQNGDRWEQALASKLHKDYEYR >Mature_159_residues MINYLKSFFLYEIIRGMSLTLKYFFKPKVTINYPYEKSHVSPRFKGEHALRRYESGEERCIACKLCEAICPAQAIVIEAD EREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEFASLTHAALIYDKERLLQNGDRWEQALASKLHKDYEYR
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI4505371, Length=154, Percent_Identity=69.4805194805195, Blast_Score=241, Evalue=2e-64, Organism=Escherichia coli, GI1788617, Length=128, Percent_Identity=38.28125, Blast_Score=102, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17555194, Length=159, Percent_Identity=69.811320754717, Blast_Score=236, Evalue=3e-63, Organism=Drosophila melanogaster, GI17864306, Length=153, Percent_Identity=71.8954248366013, Blast_Score=243, Evalue=5e-65,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 18570; Mature: 18570
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINYLKSFFLYEIIRGMSLTLKYFFKPKVTINYPYEKSHVSPRFKGEHALRRYESGEERC CHHHHHHHHHHHHHHCHHEEEHEEECCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCHHH IACKLCEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNF HHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCCC EFASLTHAALIYDKERLLQNGDRWEQALASKLHKDYEYR CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MINYLKSFFLYEIIRGMSLTLKYFFKPKVTINYPYEKSHVSPRFKGEHALRRYESGEERC CHHHHHHHHHHHHHHCHHEEEHEEECCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCHHH IACKLCEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNF HHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCCC EFASLTHAALIYDKERLLQNGDRWEQALASKLHKDYEYR CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA