| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826240
Identifier: 157826240
GI number: 157826240
Start: 1093732
End: 1094445
Strand: Direct
Name: 157826240
Synonym: A1C_06095
Alternate gene names: NA
Gene position: 1093732-1094445 (Clockwise)
Preceding gene: 157826239
Following gene: 157826241
Centisome position: 88.84
GC content: 30.95
Gene sequence:
>714_bases ATGATAAAATTACTAAAATTATTTTTTATTACTATTATCATTTTTAATCACATTGCTTTTGCAAAAGAAAGAGGGGTCTA TATAGGAGCAGCAGGAGGAATAGTTGAACCGGTCGTTAGTAAATTCCGACATAAACGCTCAAATACCGAAATAATTTTAA AAAAAACAAGTATGTATAGCGGGAAAATAGGCTATATAATATATCCACAGATAGCTATTGAATTCTCCGCAACTTATCAA CCTAAATATCGTATGCATTACATATTACCTCAGCAAAATTTAAGTAATGGTCTCACTATTCATAAAACCCAAGGTAATAC TACATTATTATCAAATATATATATGCTAAATCTTATTTATGATTTGGAACAAATCAAAACTTTCACACCTTTTGTAATAC TTGGAGGTGGAATAGCACAAGTAAAAGTTAAGCCTACCTCCCATAGGTGGAGTGTTATAAATTGTGATTATTTTACAGTA AGAAGAACTCATAAAAATTGCGTTGCTTGGCAAGCAGGTCTTGGAATTTCACAAGATGTAACTTCAAATTTAAGTATTGA TGCAACAGCAAAATTACAAACGGCATATAGAGTAATAATTAGTTATGATACGCTTGATATGAAAACAGGGAAATTCGTGC CGGCAAATCATATCAAAAAAACTATAGCAGTTGGGGAATTTGGCATAGGATTTACTTATAGATTGCCATTTTAA
Upstream 100 bases:
>100_bases TTTATTACTGTTTGGTATAATTGCTTCAATAATTAGAAAAAATATGATTGACCATTAATAAAGTGGATATATAATATTTT TTATTTTTTAGGCAATTGTA
Downstream 100 bases:
>100_bases TAATTCTGTGAAATATTTATATGAAAGCATCGTCGACGTCATTGCAAGGAAAGTGCCTAACAATTGACGAAGCAATTTCA GGATATTTGACGAGATTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIKLLKLFFITIIIFNHIAFAKERGVYIGAAGGIVEPVVSKFRHKRSNTEIILKKTSMYSGKIGYIIYPQIAIEFSATYQ PKYRMHYILPQQNLSNGLTIHKTQGNTTLLSNIYMLNLIYDLEQIKTFTPFVILGGGIAQVKVKPTSHRWSVINCDYFTV RRTHKNCVAWQAGLGISQDVTSNLSIDATAKLQTAYRVIISYDTLDMKTGKFVPANHIKKTIAVGEFGIGFTYRLPF
Sequences:
>Translated_237_residues MIKLLKLFFITIIIFNHIAFAKERGVYIGAAGGIVEPVVSKFRHKRSNTEIILKKTSMYSGKIGYIIYPQIAIEFSATYQ PKYRMHYILPQQNLSNGLTIHKTQGNTTLLSNIYMLNLIYDLEQIKTFTPFVILGGGIAQVKVKPTSHRWSVINCDYFTV RRTHKNCVAWQAGLGISQDVTSNLSIDATAKLQTAYRVIISYDTLDMKTGKFVPANHIKKTIAVGEFGIGFTYRLPF >Mature_237_residues MIKLLKLFFITIIIFNHIAFAKERGVYIGAAGGIVEPVVSKFRHKRSNTEIILKKTSMYSGKIGYIIYPQIAIEFSATYQ PKYRMHYILPQQNLSNGLTIHKTQGNTTLLSNIYMLNLIYDLEQIKTFTPFVILGGGIAQVKVKPTSHRWSVINCDYFTV RRTHKNCVAWQAGLGISQDVTSNLSIDATAKLQTAYRVIISYDTLDMKTGKFVPANHIKKTIAVGEFGIGFTYRLPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011250 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26806; Mature: 26806
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLLKLFFITIIIFNHIAFAKERGVYIGAAGGIVEPVVSKFRHKRSNTEIILKKTSMYS CHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCC GKIGYIIYPQIAIEFSATYQPKYRMHYILPQQNLSNGLTIHKTQGNTTLLSNIYMLNLIY CCEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCEEEEHHHEEEHHHH DLEQIKTFTPFVILGGGIAQVKVKPTSHRWSVINCDYFTVRRTHKNCVAWQAGLGISQDV HHHHHHHCCCEEEECCCEEEEEEECCCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCC TSNLSIDATAKLQTAYRVIISYDTLDMKTGKFVPANHIKKTIAVGEFGIGFTYRLPF CCCCEEEEEEHHEEEEEEEEEECCEECCCCCCCCHHHHHHEEEEECCCCCEEEECCC >Mature Secondary Structure MIKLLKLFFITIIIFNHIAFAKERGVYIGAAGGIVEPVVSKFRHKRSNTEIILKKTSMYS CHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCC GKIGYIIYPQIAIEFSATYQPKYRMHYILPQQNLSNGLTIHKTQGNTTLLSNIYMLNLIY CCEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCEEEEHHHEEEHHHH DLEQIKTFTPFVILGGGIAQVKVKPTSHRWSVINCDYFTVRRTHKNCVAWQAGLGISQDV HHHHHHHCCCEEEECCCEEEEEEECCCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCC TSNLSIDATAKLQTAYRVIISYDTLDMKTGKFVPANHIKKTIAVGEFGIGFTYRLPF CCCCEEEEEEHHEEEEEEEEEECCEECCCCCCCCHHHHHHEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274032; 9823893 [H]