| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is ygjT [C]
Identifier: 157826239
GI number: 157826239
Start: 1092784
End: 1093689
Strand: Direct
Name: ygjT [C]
Synonym: A1C_06090
Alternate gene names: 157826239
Gene position: 1092784-1093689 (Clockwise)
Preceding gene: 157826238
Following gene: 157826240
Centisome position: 88.77
GC content: 26.93
Gene sequence:
>906_bases ATGAGTTGGATTATTTTTTATACGGTAATCGCTGCTTTACTGATTCTTGATTTGGGAATAGTACACAAGAACAATACCAT AGTGAGCTTTAAAAAAAGCGTACTGTTTAGTCCTTTCTATTTTGTAATAGCTTGTTTATTCGGTATCTATGTTTACTATA ATACAGGGGCAGACCATGCTCGTGAATATTATACTTGCTTTCTCATTGAGAAAGCTATGTCCCTTGATAATATTTTTATT ATCTCTATTATTTTCCAATTTTTTAAAATTCCCGGGAAATATCAACATCGTGTCTTATTTTTTGGTATAATAGGCGTAAT AATATTCAGAGCAATAATGATTTATGGTGGTATTATTCTTATAAATAAATTTGCCTGGTTATTATATATTTTTGCCGTAA TACTTATTGCTACAGGTATAAAAACTTTCTATGTATCACATAAAACTTTTGATATACAAAATTCTTATATTTACAAGTCA ATAATAAAAAATCTAAATATTACCACTAATATTGAAGGGGATAAATTTGTTGTTAAACGTAATAATAAACTATATTTTAC TCCCCTTTTTATATCGTTAGTGCTTATAGAAGCAATAGATTTAGTCTTTGCTATAGATAGTATACCGGCAATATTTGCAA TTACTAATGATGTTTATATAATTTATACTTCAAATATTTTTGCTATTTTAGGGCTTAGAGCATTATTCTTTTGTTTAGCA GAAATTGTAGAACGTTTCAGTTATATAAAACATTCTTTGGCTTTAATTTTAATATTTATCGGCTTTAAGATATTTATTCA TCATTATATAGCAATTCCGGCATACGTGTCGCTCACTGTAACTATTACTTTATTACTGTTTGGTATAATTGCTTCAATAA TTAGAAAAAATATGATTGACCATTAA
Upstream 100 bases:
>100_bases TATTTAAAACAAGGAGAAAATACTATAAGATTCCAGCTAAGAGTTATTTTTGGTGGTGGACTATATTTCCACATGCAATA TAAAATGAAGAGATAGGTAA
Downstream 100 bases:
>100_bases TAAAGTGGATATATAATATTTTTTATTTTTTAGGCAATTGTAATGATAAAATTACTAAAATTATTTTTTATTACTATTAT CATTTTTAATCACATTGCTT
Product: tellurium resistance protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSWIIFYTVIAALLILDLGIVHKNNTIVSFKKSVLFSPFYFVIACLFGIYVYYNTGADHAREYYTCFLIEKAMSLDNIFI ISIIFQFFKIPGKYQHRVLFFGIIGVIIFRAIMIYGGIILINKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKS IIKNLNITTNIEGDKFVVKRNNKLYFTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLA EIVERFSYIKHSLALILIFIGFKIFIHHYIAIPAYVSLTVTITLLLFGIIASIIRKNMIDH
Sequences:
>Translated_301_residues MSWIIFYTVIAALLILDLGIVHKNNTIVSFKKSVLFSPFYFVIACLFGIYVYYNTGADHAREYYTCFLIEKAMSLDNIFI ISIIFQFFKIPGKYQHRVLFFGIIGVIIFRAIMIYGGIILINKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKS IIKNLNITTNIEGDKFVVKRNNKLYFTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLA EIVERFSYIKHSLALILIFIGFKIFIHHYIAIPAYVSLTVTITLLLFGIIASIIRKNMIDH >Mature_300_residues SWIIFYTVIAALLILDLGIVHKNNTIVSFKKSVLFSPFYFVIACLFGIYVYYNTGADHAREYYTCFLIEKAMSLDNIFII SIIFQFFKIPGKYQHRVLFFGIIGVIIFRAIMIYGGIILINKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKSI IKNLNITTNIEGDKFVVKRNNKLYFTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLAE IVERFSYIKHSLALILIFIGFKIFIHHYIAIPAYVSLTVTITLLLFGIIASIIRKNMIDH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=292, Percent_Identity=39.3835616438356, Blast_Score=210, Evalue=7e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 34648; Mature: 34517
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWIIFYTVIAALLILDLGIVHKNNTIVSFKKSVLFSPFYFVIACLFGIYVYYNTGADHA CCCHHHHHHHHHHHHHHHHHEECCCEEEEEHHHHHCCHHHHHHHHHHHHHEEECCCHHHH REYYTCFLIEKAMSLDNIFIISIIFQFFKIPGKYQHRVLFFGIIGVIIFRAIMIYGGIIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH INKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKSIIKNLNITTNIEGDKFVVKR HHHHHHHHHHHHHHHHHHCHHHEEEECEEEECCHHHHHHHHHHCCCEEEECCCCEEEEEE NNKLYFTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLA CCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHH EIVERFSYIKHSLALILIFIGFKIFIHHYIAIPAYVSLTVTITLLLFGIIASIIRKNMID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC H C >Mature Secondary Structure SWIIFYTVIAALLILDLGIVHKNNTIVSFKKSVLFSPFYFVIACLFGIYVYYNTGADHA CCHHHHHHHHHHHHHHHHHEECCCEEEEEHHHHHCCHHHHHHHHHHHHHEEECCCHHHH REYYTCFLIEKAMSLDNIFIISIIFQFFKIPGKYQHRVLFFGIIGVIIFRAIMIYGGIIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH INKFAWLLYIFAVILIATGIKTFYVSHKTFDIQNSYIYKSIIKNLNITTNIEGDKFVVKR HHHHHHHHHHHHHHHHHHCHHHEEEECEEEECCHHHHHHHHHHCCCEEEECCCCEEEEEE NNKLYFTPLFISLVLIEAIDLVFAIDSIPAIFAITNDVYIIYTSNIFAILGLRALFFCLA CCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHH EIVERFSYIKHSLALILIFIGFKIFIHHYIAIPAYVSLTVTITLLLFGIIASIIRKNMID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]