| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is gmk [H]
Identifier: 157826218
GI number: 157826218
Start: 1060517
End: 1061095
Strand: Reverse
Name: gmk [H]
Synonym: A1C_05985
Alternate gene names: 157826218
Gene position: 1061095-1060517 (Counterclockwise)
Preceding gene: 157826219
Following gene: 157826217
Centisome position: 86.19
GC content: 30.74
Gene sequence:
>579_bases ATGACAATAAAAAATAAAGGACTGATTATAATTTTATCTTCTCCTTCAGGTACTGGTAAGTCAAGTTTAGCTAAAGCATT ATTGAAAATAGATAATAATTTACGTTTATCTATTTCGGCAACTACAAGAAAACCACGTTTAGGAGAAGTAGATGGCATAC ACTATTACTTTAAGACCAGTCTAGAATTTAAAGAATTAGTTAAGCAGAATAAATTTTTTGAATATGCTAAAATATACGAT AATTATTACGGTACGCCTAAAGAATATGTCGAAATGTTATTAAATCAAGGCTTAGACGTTTTGTTTGATATTGATTGGCA AGGAGCAAAGAGCATTAAGAAAAATGCTACTAATGTTGTTGCTATATTTATATTGCCTCCTAGTATTGAAATACTGGAAC AACGCTTAAGGAAGAGAGCTACCGATAATGAAGAAGCAATAAAATTACGTATGAAGTCGGCACAAAACGAAATGTCACAT GCTAATGAGTACGATTATGTGATTACTAACGATGATTTTAGCCATACTCTTAAAAAAATACATGCTATTATAGTTGCAGA ACGGGAAAAAGCTTTTTGA
Upstream 100 bases:
>100_bases TCACCTGTACTTTATCTACTGCTTTCGCAGGCTTGCATTTAAAGTCATCTTGTCTGAATCTTTCTGAAATATGCTGTACC TACGAAATAAAATATAAAAT
Downstream 100 bases:
>100_bases CTTTATCACTTTTCCTTTTTATACTGAAAATTGGAAGCTTAACTGGTGAATTTCAAAAATTGGCTACGTCGTTCTGCAAG ATCTCCGGTGCTGAATGTTT
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTIKNKGLIIILSSPSGTGKSSLAKALLKIDNNLRLSISATTRKPRLGEVDGIHYYFKTSLEFKELVKQNKFFEYAKIYD NYYGTPKEYVEMLLNQGLDVLFDIDWQGAKSIKKNATNVVAIFILPPSIEILEQRLRKRATDNEEAIKLRMKSAQNEMSH ANEYDYVITNDDFSHTLKKIHAIIVAEREKAF
Sequences:
>Translated_192_residues MTIKNKGLIIILSSPSGTGKSSLAKALLKIDNNLRLSISATTRKPRLGEVDGIHYYFKTSLEFKELVKQNKFFEYAKIYD NYYGTPKEYVEMLLNQGLDVLFDIDWQGAKSIKKNATNVVAIFILPPSIEILEQRLRKRATDNEEAIKLRMKSAQNEMSH ANEYDYVITNDDFSHTLKKIHAIIVAEREKAF >Mature_191_residues TIKNKGLIIILSSPSGTGKSSLAKALLKIDNNLRLSISATTRKPRLGEVDGIHYYFKTSLEFKELVKQNKFFEYAKIYDN YYGTPKEYVEMLLNQGLDVLFDIDWQGAKSIKKNATNVVAIFILPPSIEILEQRLRKRATDNEEAIKLRMKSAQNEMSHA NEYDYVITNDDFSHTLKKIHAIIVAEREKAF
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RPE1 insert domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=186, Percent_Identity=36.5591397849462, Blast_Score=121, Evalue=5e-28, Organism=Homo sapiens, GI4504221, Length=186, Percent_Identity=36.5591397849462, Blast_Score=121, Evalue=5e-28, Organism=Homo sapiens, GI226874831, Length=186, Percent_Identity=36.5591397849462, Blast_Score=121, Evalue=5e-28, Organism=Homo sapiens, GI38570142, Length=183, Percent_Identity=27.8688524590164, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI119943106, Length=148, Percent_Identity=31.0810810810811, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI111154074, Length=164, Percent_Identity=32.3170731707317, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI14780902, Length=198, Percent_Identity=23.7373737373737, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI119943108, Length=149, Percent_Identity=30.8724832214765, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI261862237, Length=149, Percent_Identity=30.8724832214765, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI262118263, Length=179, Percent_Identity=27.3743016759777, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI262118259, Length=179, Percent_Identity=27.3743016759777, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI4505237, Length=179, Percent_Identity=27.3743016759777, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI262118255, Length=179, Percent_Identity=27.3743016759777, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1790080, Length=185, Percent_Identity=50.2702702702703, Blast_Score=192, Evalue=1e-50, Organism=Caenorhabditis elegans, GI193203132, Length=187, Percent_Identity=37.9679144385027, Blast_Score=130, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17508835, Length=187, Percent_Identity=37.9679144385027, Blast_Score=130, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17557440, Length=182, Percent_Identity=28.021978021978, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71988048, Length=177, Percent_Identity=24.8587570621469, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71988041, Length=177, Percent_Identity=24.8587570621469, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71984092, Length=146, Percent_Identity=28.0821917808219, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=183, Percent_Identity=42.0765027322404, Blast_Score=143, Evalue=1e-35, Organism=Drosophila melanogaster, GI21356141, Length=182, Percent_Identity=37.3626373626374, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI116007136, Length=183, Percent_Identity=26.2295081967213, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI85724806, Length=183, Percent_Identity=26.2295081967213, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI45554481, Length=183, Percent_Identity=26.2295081967213, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24640542, Length=183, Percent_Identity=26.2295081967213, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI45554489, Length=183, Percent_Identity=26.2295081967213, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI161077626, Length=183, Percent_Identity=26.2295081967213, Blast_Score=70, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - InterPro: IPR005728 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 22007; Mature: 21875
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKNKGLIIILSSPSGTGKSSLAKALLKIDNNLRLSISATTRKPRLGEVDGIHYYFKTS CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECC LEFKELVKQNKFFEYAKIYDNYYGTPKEYVEMLLNQGLDVLFDIDWQGAKSIKKNATNVV CHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCEEE AIFILPPSIEILEQRLRKRATDNEEAIKLRMKSAQNEMSHANEYDYVITNDDFSHTLKKI EEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH HAIIVAEREKAF HHHHEECCCCCC >Mature Secondary Structure TIKNKGLIIILSSPSGTGKSSLAKALLKIDNNLRLSISATTRKPRLGEVDGIHYYFKTS CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECC LEFKELVKQNKFFEYAKIYDNYYGTPKEYVEMLLNQGLDVLFDIDWQGAKSIKKNATNVV CHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCEEE AIFILPPSIEILEQRLRKRATDNEEAIKLRMKSAQNEMSHANEYDYVITNDDFSHTLKKI EEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH HAIIVAEREKAF HHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]