| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157826156
Identifier: 157826156
GI number: 157826156
Start: 1010624
End: 1010776
Strand: Direct
Name: 157826156
Synonym: A1C_05665
Alternate gene names: NA
Gene position: 1010624-1010776 (Clockwise)
Preceding gene: 157826155
Following gene: 157826164
Centisome position: 82.09
GC content: 27.45
Gene sequence:
>153_bases ATGTCCAAAATAATATTTGATGCCCCTACACTAATTGCATTATTTGATAAAGAAAATGGTTACCAATTGATTAAGAAATA TATGCGCAATGGAGTTATTTCAATCGTAAATATTGCTGCAGTTTATAAATATTGTATAGAAAAACAAGGATGA
Upstream 100 bases:
>100_bases ATTTTCACCAAAAATCAAATTGATAAAAATATTTCTATAGTAGATGATTTTATTGCTGAAAGACGTCAGGAATATTTAAT GGAAGAAAAAAAAGTAACAA
Downstream 100 bases:
>100_bases ACGGAAGAAAGTGCAAAAATACTTACTAAATTATTAGATATCAAAATTATAGACTTTTATCCTGAGCAAGCACTAATTAG TGCAAATATAATTAATACAA
Product: PilT domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MSKIIFDAPTLIALFDKENGYQLIKKYMRNGVISIVNIAAVYKYCIEKQG
Sequences:
>Translated_50_residues MSKIIFDAPTLIALFDKENGYQLIKKYMRNGVISIVNIAAVYKYCIEKQG >Mature_49_residues SKIIFDAPTLIALFDKENGYQLIKKYMRNGVISIVNIAAVYKYCIEKQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5713; Mature: 5582
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIFDAPTLIALFDKENGYQLIKKYMRNGVISIVNIAAVYKYCIEKQG CCCEECCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKIIFDAPTLIALFDKENGYQLIKKYMRNGVISIVNIAAVYKYCIEKQG CCEECCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA