Click here to switch to the map view.

The map label for this gene is yhiR [H]

Identifier: 157826140

GI number: 157826140

Start: 993546

End: 994334

Strand: Reverse

Name: yhiR [H]

Synonym: A1C_05585

Alternate gene names: 157826140

Gene position: 994334-993546 (Counterclockwise)

Preceding gene: 157826141

Following gene: 157826139

Centisome position: 80.77

GC content: 28.64

Gene sequence:

>789_bases
ATGAACTATCGTCATATTTATCATGCAGGCAATTTTGCCGATATAGTCAAACATTTAGTGCTAATTAGCATTTTAGAACA
GCTTAAGAAAAAAGATAAACCTTTTTCGGTTTTAGATGCTTTTGCAGGTCTTGGTCTTTATGATTTAAACTCGGAAGCGG
CTTCTAAAACTCTAGAAAGCAATACGGGAATTAATAAATTACTGCAAGCTACTAATCCTATCCTTGAACTCTTACAAACT
TTCTTAAATATAGTAAATTTAGCAGGACAAAATCATTATCCTGGCTCACCTTTTATAATTAAACAATTATTAAGAGCAAA
TGATCGTTTAATTGCCTGCGAACTGCATCCAAGCGATTATTTAAGTTTAAAAAAATTATTACCAAAAGATACGCATAATA
TAGATGCTTATAATGCGATTAAAGCTTTTCTACCATTTAAAGAGAATAGAGGGTTAATTTTTCTTGATCCGCCTTTTGAA
GTAAAAAATGAGTTCCAAAAATTACTTGAAGCACTTAAAAAAATTAAGCTACGAGTTCTTAATAATCCCGTCTTAATTTG
GTATCCTATAAAGGATGTACCTTTGGTCCGTGATTTTTACCACAATTACAAAAATATTGGATTTAACGAAGCTATAATTA
TTGAATATGAGCTTTTAAATAGTGATAAAAATATGGTCAAGTGTGGCTTAATGTTAATTAATCCTCTAAATATTATAGGA
GAATTAGAAAAATTAACGTGTTATTTAAGCAATATTTTAAACTTAAAATTTACGTATATTTACTTTTAA

Upstream 100 bases:

>100_bases
TTATAAAGTATATGCTCTATGTCATTCACGCGCAAGCGGGAATGACATAGAGTGATGCGAGCGAGCTGGTCATAGAAGTG
AAATTTATGATTAATTTAAA

Downstream 100 bases:

>100_bases
TGTCTTTTCAAAAATATATCTTTTTACTATTTATAGTTTTTCTTGTTCAAGGTTGCAGCAGTATTAAAGAATCTAGTGAT
ACTATATTACTTTCTACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNYRHIYHAGNFADIVKHLVLISILEQLKKKDKPFSVLDAFAGLGLYDLNSEAASKTLESNTGINKLLQATNPILELLQT
FLNIVNLAGQNHYPGSPFIIKQLLRANDRLIACELHPSDYLSLKKLLPKDTHNIDAYNAIKAFLPFKENRGLIFLDPPFE
VKNEFQKLLEALKKIKLRVLNNPVLIWYPIKDVPLVRDFYHNYKNIGFNEAIIIEYELLNSDKNMVKCGLMLINPLNIIG
ELEKLTCYLSNILNLKFTYIYF

Sequences:

>Translated_262_residues
MNYRHIYHAGNFADIVKHLVLISILEQLKKKDKPFSVLDAFAGLGLYDLNSEAASKTLESNTGINKLLQATNPILELLQT
FLNIVNLAGQNHYPGSPFIIKQLLRANDRLIACELHPSDYLSLKKLLPKDTHNIDAYNAIKAFLPFKENRGLIFLDPPFE
VKNEFQKLLEALKKIKLRVLNNPVLIWYPIKDVPLVRDFYHNYKNIGFNEAIIIEYELLNSDKNMVKCGLMLINPLNIIG
ELEKLTCYLSNILNLKFTYIYF
>Mature_262_residues
MNYRHIYHAGNFADIVKHLVLISILEQLKKKDKPFSVLDAFAGLGLYDLNSEAASKTLESNTGINKLLQATNPILELLQT
FLNIVNLAGQNHYPGSPFIIKQLLRANDRLIACELHPSDYLSLKKLLPKDTHNIDAYNAIKAFLPFKENRGLIFLDPPFE
VKNEFQKLLEALKKIKLRVLNNPVLIWYPIKDVPLVRDFYHNYKNIGFNEAIIIEYELLNSDKNMVKCGLMLINPLNIIG
ELEKLTCYLSNILNLKFTYIYF

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=245, Percent_Identity=38.7755102040816, Blast_Score=168, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 30150; Mature: 30150

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRHIYHAGNFADIVKHLVLISILEQLKKKDKPFSVLDAFAGLGLYDLNSEAASKTLES
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCHHHHHHHHC
NTGINKLLQATNPILELLQTFLNIVNLAGQNHYPGSPFIIKQLLRANDRLIACELHPSDY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHH
LSLKKLLPKDTHNIDAYNAIKAFLPFKENRGLIFLDPPFEVKNEFQKLLEALKKIKLRVL
HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC
NNPVLIWYPIKDVPLVRDFYHNYKNIGFNEAIIIEYELLNSDKNMVKCGLMLINPLNIIG
CCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHH
ELEKLTCYLSNILNLKFTYIYF
HHHHHHHHHHHHHCCEEEEEEC
>Mature Secondary Structure
MNYRHIYHAGNFADIVKHLVLISILEQLKKKDKPFSVLDAFAGLGLYDLNSEAASKTLES
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCHHHHHHHHC
NTGINKLLQATNPILELLQTFLNIVNLAGQNHYPGSPFIIKQLLRANDRLIACELHPSDY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHH
LSLKKLLPKDTHNIDAYNAIKAFLPFKENRGLIFLDPPFEVKNEFQKLLEALKKIKLRVL
HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC
NNPVLIWYPIKDVPLVRDFYHNYKNIGFNEAIIIEYELLNSDKNMVKCGLMLINPLNIIG
CCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHH
ELEKLTCYLSNILNLKFTYIYF
HHHHHHHHHHHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]