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The map label for this gene is ygaF [H]

Identifier: 157826136

GI number: 157826136

Start: 990085

End: 990555

Strand: Direct

Name: ygaF [H]

Synonym: A1C_05565

Alternate gene names: 157826136

Gene position: 990085-990555 (Clockwise)

Preceding gene: 157826128

Following gene: 157826147

Centisome position: 80.43

GC content: 31.63

Gene sequence:

>471_bases
ATGACATTAGAACTAGGAAAAAAAGTTCCTGATTTATCTTTACACATAGGTAAAGATAAAGTAATTAAACTATCGGATTT
AAAAGGAAAATTCATAGTACTATATTTTTATCCGAAAGACGATACGCCTGGATGTACTATTGAAGCACAAGATTTTAACA
AGCTAAAACCGGAATTCGATAAACTTAATACGGTAATTATCGGAGTATCCAAAGATAAGCTTGACTCTCATGATAAATTT
AAAGAAAAATATAGTTTAGGATTTGATTTAGCCTCTGATGCAAATTCAAATTTGTGTGAACAATTAGGGGTATGGGTAGA
AAAATCAATGTTCGGTAAAAAATATATGGGCATTGATAGGGCTACGTTTTTACTTGATAATGAGGGAATAGTGAAGCATA
TTTGGAGTGCGGTAAATGCTAAAAATCACGCTCAAGAAGTACTTGAAACATTACGGACTATACTTTCCTAA

Upstream 100 bases:

>100_bases
TCGTATACCGATATCATAAATAATATAATTTTAAAAAGCAATTTTAAAAAGGACATATTTAATATATAGTTTATTAATAT
AAAATAAATTTGAGTATGTC

Downstream 100 bases:

>100_bases
GTGGTTGTTACGTGGATCAATTCCACCGCTGTCGTACCGTGGCTTGACCACGGGGTGACACCGAGTGTGTTGGGCCATTC
AGTCACTTAGCTGATTACGT

Product: bacterioferritin comigratory protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTLELGKKVPDLSLHIGKDKVIKLSDLKGKFIVLYFYPKDDTPGCTIEAQDFNKLKPEFDKLNTVIIGVSKDKLDSHDKF
KEKYSLGFDLASDANSNLCEQLGVWVEKSMFGKKYMGIDRATFLLDNEGIVKHIWSAVNAKNHAQEVLETLRTILS

Sequences:

>Translated_156_residues
MTLELGKKVPDLSLHIGKDKVIKLSDLKGKFIVLYFYPKDDTPGCTIEAQDFNKLKPEFDKLNTVIIGVSKDKLDSHDKF
KEKYSLGFDLASDANSNLCEQLGVWVEKSMFGKKYMGIDRATFLLDNEGIVKHIWSAVNAKNHAQEVLETLRTILS
>Mature_155_residues
TLELGKKVPDLSLHIGKDKVIKLSDLKGKFIVLYFYPKDDTPGCTIEAQDFNKLKPEFDKLNTVIIGVSKDKLDSHDKFK
EKYSLGFDLASDANSNLCEQLGVWVEKSMFGKKYMGIDRATFLLDNEGIVKHIWSAVNAKNHAQEVLETLRTILS

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=161, Percent_Identity=32.9192546583851, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI4505591, Length=146, Percent_Identity=35.6164383561644, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI32455266, Length=146, Percent_Identity=35.6164383561644, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI32455264, Length=146, Percent_Identity=35.6164383561644, Blast_Score=64, Evalue=7e-11,
Organism=Escherichia coli, GI1788825, Length=150, Percent_Identity=38.6666666666667, Blast_Score=114, Evalue=3e-27,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17638; Mature: 17506

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLELGKKVPDLSLHIGKDKVIKLSDLKGKFIVLYFYPKDDTPGCTIEAQDFNKLKPEFD
CCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCC
KLNTVIIGVSKDKLDSHDKFKEKYSLGFDLASDANSNLCEQLGVWVEKSMFGKKYMGIDR
CCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCC
ATFLLDNEGIVKHIWSAVNAKNHAQEVLETLRTILS
EEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TLELGKKVPDLSLHIGKDKVIKLSDLKGKFIVLYFYPKDDTPGCTIEAQDFNKLKPEFD
CCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCC
KLNTVIIGVSKDKLDSHDKFKEKYSLGFDLASDANSNLCEQLGVWVEKSMFGKKYMGIDR
CCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCC
ATFLLDNEGIVKHIWSAVNAKNHAQEVLETLRTILS
EEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]