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The map label for this gene is yfjD [C]

Identifier: 157826127

GI number: 157826127

Start: 976332

End: 977597

Strand: Direct

Name: yfjD [C]

Synonym: A1C_05510

Alternate gene names: 157826127

Gene position: 976332-977597 (Clockwise)

Preceding gene: 157826126

Following gene: 157826128

Centisome position: 79.31

GC content: 32.54

Gene sequence:

>1266_bases
ATGCTTGTGATCGTTATTATAATAATGATCGCCTTATCTGCTTTATTTGCGGCTACCGAAACTGCTATAACCGCGTCTTC
CCCAGGGAAGATTCATAAGCTTAAAATCACAGGTAATAAGCGTGCTAAAACAGTTTTAGAGGTTCTTAAGAAAAAAGAAA
AAGTCATAGGAACTCTACTAATCGGTAATAGCCTAATCAATACTGTTTGTACTACTATTGCTACTACTCTCTTTATTAGC
TTTCTTGGAGATAATGGACCTATTGTTGCTTCCGGCGTTATGGCTTTTATAATTATTGTTTTTGCCGAAGTAGTACCGAA
AGCAATCGCCGTTGCTAAACCTGAACAATTAGCATTAAAAATGGCTTCAACTATAGTAATATTTTTAAAGCTTTTCAAAC
CTATTAATATTGCTCTTGATTACATTACAAAAATATTTTGCTTCATATTTCGTATTAATTTAAGTCCTCAAATATCAGGA
ACGGAAGAAGTAAGAGGCGTGATTGAGCATTACCATCAAGAAGGCGGAGTTTATAAATCCGATCGTAATATGCTCGGTGG
GATATTAGATATACGTAATATGACGGTATCGGAAATTATGACTCACAGAAGTAGTATTATAGCCCTTAATATCGACCTAC
CTCATGAAGTGATAATTAAAACTTTATTATCGGGCACTCATACACGTATACCTTTATGGCAAGATAATAGAGATAATATA
ATAGGGATTCTCAATCTAAAAGATTTGCTTAAGGCATTATATGAAAATAATAATGATACAAAAAAAATTGATATTAATAC
ACTTCTAACTCCACCTTGGTTTATCCATGAGAATGCACTTGTAGTAGACCAGCTACATGCATTTAGAGAACGTAATAATC
ATTTTGCTTGTGTTGTAGATGAATATGGTGATTTACAGGGAATTATTACTCTTGAAGATGTGATAGAAGAAATCGTAGGA
CCTATTACCGATGAACATGATAGGCTTAATAATGAAATTATCCAGAAGTCTAACACCGAGTTCATTATAAAAGGAACTAC
GACTATTAGAGATATTAACCGAGAACTTGATTGGAATTTATCGGATGAGGATGCAAACACTATAGCAGGATTAATAATCC
ATAAAATTGCTAGAATTCCAAATCAAGGAGAAGTAATTGAAATATTTAACTTTAAAATAATAATTTTAAAGAAAATTGCC
AATAAGATTGATAGTGTAAAAATTACCGTATTACCTACTACCGAGGAAATAATAAGCAGTGAGTAA

Upstream 100 bases:

>100_bases
TTGAAGTTCTATCGTAGTAGAATAAAAAAACATTAGGCAAAATTTCTAATTCCTAATATAATTATTTATAGTTAATTTAT
ATTTAACAAGAATGACTACC

Downstream 100 bases:

>100_bases
AATCGGTAATTTTTTACTGCTAATAACGATGTGCTTAAGTGGGATATCGATTGTTTATGTACCTTTGTTATCACGTGGCT
TGACCACAGGATCCAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MLVIVIIIMIALSALFAATETAITASSPGKIHKLKITGNKRAKTVLEVLKKKEKVIGTLLIGNSLINTVCTTIATTLFIS
FLGDNGPIVASGVMAFIIIVFAEVVPKAIAVAKPEQLALKMASTIVIFLKLFKPINIALDYITKIFCFIFRINLSPQISG
TEEVRGVIEHYHQEGGVYKSDRNMLGGILDIRNMTVSEIMTHRSSIIALNIDLPHEVIIKTLLSGTHTRIPLWQDNRDNI
IGILNLKDLLKALYENNNDTKKIDINTLLTPPWFIHENALVVDQLHAFRERNNHFACVVDEYGDLQGIITLEDVIEEIVG
PITDEHDRLNNEIIQKSNTEFIIKGTTTIRDINRELDWNLSDEDANTIAGLIIHKIARIPNQGEVIEIFNFKIIILKKIA
NKIDSVKITVLPTTEEIISSE

Sequences:

>Translated_421_residues
MLVIVIIIMIALSALFAATETAITASSPGKIHKLKITGNKRAKTVLEVLKKKEKVIGTLLIGNSLINTVCTTIATTLFIS
FLGDNGPIVASGVMAFIIIVFAEVVPKAIAVAKPEQLALKMASTIVIFLKLFKPINIALDYITKIFCFIFRINLSPQISG
TEEVRGVIEHYHQEGGVYKSDRNMLGGILDIRNMTVSEIMTHRSSIIALNIDLPHEVIIKTLLSGTHTRIPLWQDNRDNI
IGILNLKDLLKALYENNNDTKKIDINTLLTPPWFIHENALVVDQLHAFRERNNHFACVVDEYGDLQGIITLEDVIEEIVG
PITDEHDRLNNEIIQKSNTEFIIKGTTTIRDINRELDWNLSDEDANTIAGLIIHKIARIPNQGEVIEIFNFKIIILKKIA
NKIDSVKITVLPTTEEIISSE
>Mature_421_residues
MLVIVIIIMIALSALFAATETAITASSPGKIHKLKITGNKRAKTVLEVLKKKEKVIGTLLIGNSLINTVCTTIATTLFIS
FLGDNGPIVASGVMAFIIIVFAEVVPKAIAVAKPEQLALKMASTIVIFLKLFKPINIALDYITKIFCFIFRINLSPQISG
TEEVRGVIEHYHQEGGVYKSDRNMLGGILDIRNMTVSEIMTHRSSIIALNIDLPHEVIIKTLLSGTHTRIPLWQDNRDNI
IGILNLKDLLKALYENNNDTKKIDINTLLTPPWFIHENALVVDQLHAFRERNNHFACVVDEYGDLQGIITLEDVIEEIVG
PITDEHDRLNNEIIQKSNTEFIIKGTTTIRDINRELDWNLSDEDANTIAGLIIHKIARIPNQGEVIEIFNFKIIILKKIA
NKIDSVKITVLPTTEEIISSE

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=387, Percent_Identity=24.8062015503876, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI94681046, Length=375, Percent_Identity=25.6, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI40068053, Length=347, Percent_Identity=25.3602305475504, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI40068055, Length=347, Percent_Identity=25.3602305475504, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI40068051, Length=259, Percent_Identity=23.9382239382239, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI145693175, Length=412, Percent_Identity=31.5533980582524, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI1790664, Length=430, Percent_Identity=23.4883720930233, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI1786879, Length=237, Percent_Identity=29.957805907173, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI87082033, Length=236, Percent_Identity=27.5423728813559, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788119, Length=237, Percent_Identity=29.957805907173, Blast_Score=96, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71980512, Length=349, Percent_Identity=21.4899713467049, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17539402, Length=353, Percent_Identity=23.5127478753541, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324512, Length=346, Percent_Identity=25.7225433526012, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46963; Mature: 46963

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIVIIIMIALSALFAATETAITASSPGKIHKLKITGNKRAKTVLEVLKKKEKVIGTLL
CHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
IGNSLINTVCTTIATTLFISFLGDNGPIVASGVMAFIIIVFAEVVPKAIAVAKPEQLALK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MASTIVIFLKLFKPINIALDYITKIFCFIFRINLSPQISGTEEVRGVIEHYHQEGGVYKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEEC
DRNMLGGILDIRNMTVSEIMTHRSSIIALNIDLPHEVIIKTLLSGTHTRIPLWQDNRDNI
CCHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCEEECCCCCE
IGILNLKDLLKALYENNNDTKKIDINTLLTPPWFIHENALVVDQLHAFRERNNHFACVVD
EEEECHHHHHHHHHCCCCCCEEEEEEEEECCCEEEECCCHHHHHHHHHHHCCCCEEEEEE
EYGDLQGIITLEDVIEEIVGPITDEHDRLNNEIIQKSNTEFIIKGTTTIRDINRELDWNL
CCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHCHHCCCCC
SDEDANTIAGLIIHKIARIPNQGEVIEIFNFKIIILKKIANKIDSVKITVLPTTEEIISS
CCCCHHHHHHHHHHHHHCCCCCCCEEEEECEEEHHHHHHHHHHCCEEEEEECCHHHHHCC
E
C
>Mature Secondary Structure
MLVIVIIIMIALSALFAATETAITASSPGKIHKLKITGNKRAKTVLEVLKKKEKVIGTLL
CHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
IGNSLINTVCTTIATTLFISFLGDNGPIVASGVMAFIIIVFAEVVPKAIAVAKPEQLALK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MASTIVIFLKLFKPINIALDYITKIFCFIFRINLSPQISGTEEVRGVIEHYHQEGGVYKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEEC
DRNMLGGILDIRNMTVSEIMTHRSSIIALNIDLPHEVIIKTLLSGTHTRIPLWQDNRDNI
CCHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCEEECCCCCE
IGILNLKDLLKALYENNNDTKKIDINTLLTPPWFIHENALVVDQLHAFRERNNHFACVVD
EEEECHHHHHHHHHCCCCCCEEEEEEEEECCCEEEECCCHHHHHHHHHHHCCCCEEEEEE
EYGDLQGIITLEDVIEEIVGPITDEHDRLNNEIIQKSNTEFIIKGTTTIRDINRELDWNL
CCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHCHHCCCCC
SDEDANTIAGLIIHKIARIPNQGEVIEIFNFKIIILKKIANKIDSVKITVLPTTEEIISS
CCCCHHHHHHHHHHHHHCCCCCCCEEEEECEEEHHHHHHHHHHCCEEEEEECCHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]