Click here to switch to the map view.

The map label for this gene is rmuC [H]

Identifier: 157826107

GI number: 157826107

Start: 959496

End: 960782

Strand: Direct

Name: rmuC [H]

Synonym: A1C_05400

Alternate gene names: 157826107

Gene position: 959496-960782 (Clockwise)

Preceding gene: 157826106

Following gene: 157826112

Centisome position: 77.94

GC content: 34.03

Gene sequence:

>1287_bases
ATGCCTTATTTATTAGCGGTTACCGCAGCTATTCTGCTTATTTTACTAGCTTTAATCATCTTATTTTATGTAAAAACTAA
AACCTTAAAAAGGCAACTACAATTCTTATCAGAGCAGAATTTAGAAATTAGCAATAACAACCAATTATTGCACCAAGAAA
AAATAGGATGTTTGCAAAAAATTGAGCAATTGAAGTGCAAAGTAGAATATCAAGAACAGACTATTAAGGATTCAAAAAAA
ATAAGAGAAGAATCATTTTCATCGGCTAAAGCTGCTTTATTTGACCTTGGGAAAGATTTGTCCAAGCAATTAATAGAGAT
ACATAAAATGGAAAACACAGCGACAAGAGAGCTGGCCGAGCAAAATATCGCTACTGCTTCAGGAAAATTTAATAGCGAGT
TTGAGAGATTGATTACTATGGTAGGAGCATTACATAAAGATATAGAGCAATCAAAAGATACCGTTGATTTGATAAAACAG
TCGCTACTTTCTCCTATCGGTGCGGGGTTACTTGCTGAAATTACGCTTGAAAATATCCTAAAATCGTCAGGCTTACGTCC
TAACCTAGATTTCATTATGCAATACGGTCTGACTACAACAGATAGCGGGAAGCTAAGACCTGATGCTATTATTTTTCTTC
CTTCCGATAATTTAATGGTCATTGATTCCAAAGCTTCAAAGTTTCTAGTTAATGAGCAGGATAATAGCGGGAATCTCAGC
AAAACTATGAATTATCATTTAAAATCTCTAGCTAATAAAGACTATGCTGCAAATATTGTAACTAATCTAAACAAAAAGGA
TCAGAACTTTAACAACGTTATTACTTTAATGTTTTTACCAACTGAACAAGCGGTCGAGAAAGTCATTGCAGCCGACCATG
AATTTTTACAGAAAGCTTGGCGCTGTAATATCTTTCCAGTAGGACCTGCTGGGCTTATGAATATGCTATCATTTGCAAAA
TTTCAAATTACCGACCATCGTCGTTCAGAAAATTATAAGGTAATCATTGAAGAAGTAAGAAAACTATTAAGCTCTATAGG
TACTATGGCTGATTATTCTCAAAAGATCGGTAATAATATACAAAATATGGTTACTAATTATGATAAATTTGCTGCCTCGT
TTAATCGTAATTTTATGTCAAGAGTGAAGAACATTAACAAGCTTGGCATTGATTCAGGAAATAAAGCAATGCCTGCGGCC
TTAGAGCGTTATCAAATCGTTTCCTCTAAATCTGAGATTATCGAAGTAGAAGCCGCAAATCCACCACAAATAGAAGAAAA
ATTATAG

Upstream 100 bases:

>100_bases
GGTAATGCTATAAATTCATAAAAATATGATAAGTAAATGTCGCAATAGTTAAGACTGTTCCGATATTTATAACGCAATGC
TCACATGAATTACAAAATAT

Downstream 100 bases:

>100_bases
AGGTATACTATAACTTTACCTATAATGCTCATAACGGATAATTTGTGGTGGATTCATAAATATCCTTGCATTATGCTTAG
AACGCATACACTCATGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MPYLLAVTAAILLILLALIILFYVKTKTLKRQLQFLSEQNLEISNNNQLLHQEKIGCLQKIEQLKCKVEYQEQTIKDSKK
IREESFSSAKAALFDLGKDLSKQLIEIHKMENTATRELAEQNIATASGKFNSEFERLITMVGALHKDIEQSKDTVDLIKQ
SLLSPIGAGLLAEITLENILKSSGLRPNLDFIMQYGLTTTDSGKLRPDAIIFLPSDNLMVIDSKASKFLVNEQDNSGNLS
KTMNYHLKSLANKDYAANIVTNLNKKDQNFNNVITLMFLPTEQAVEKVIAADHEFLQKAWRCNIFPVGPAGLMNMLSFAK
FQITDHRRSENYKVIIEEVRKLLSSIGTMADYSQKIGNNIQNMVTNYDKFAASFNRNFMSRVKNINKLGIDSGNKAMPAA
LERYQIVSSKSEIIEVEAANPPQIEEKL

Sequences:

>Translated_428_residues
MPYLLAVTAAILLILLALIILFYVKTKTLKRQLQFLSEQNLEISNNNQLLHQEKIGCLQKIEQLKCKVEYQEQTIKDSKK
IREESFSSAKAALFDLGKDLSKQLIEIHKMENTATRELAEQNIATASGKFNSEFERLITMVGALHKDIEQSKDTVDLIKQ
SLLSPIGAGLLAEITLENILKSSGLRPNLDFIMQYGLTTTDSGKLRPDAIIFLPSDNLMVIDSKASKFLVNEQDNSGNLS
KTMNYHLKSLANKDYAANIVTNLNKKDQNFNNVITLMFLPTEQAVEKVIAADHEFLQKAWRCNIFPVGPAGLMNMLSFAK
FQITDHRRSENYKVIIEEVRKLLSSIGTMADYSQKIGNNIQNMVTNYDKFAASFNRNFMSRVKNINKLGIDSGNKAMPAA
LERYQIVSSKSEIIEVEAANPPQIEEKL
>Mature_427_residues
PYLLAVTAAILLILLALIILFYVKTKTLKRQLQFLSEQNLEISNNNQLLHQEKIGCLQKIEQLKCKVEYQEQTIKDSKKI
REESFSSAKAALFDLGKDLSKQLIEIHKMENTATRELAEQNIATASGKFNSEFERLITMVGALHKDIEQSKDTVDLIKQS
LLSPIGAGLLAEITLENILKSSGLRPNLDFIMQYGLTTTDSGKLRPDAIIFLPSDNLMVIDSKASKFLVNEQDNSGNLSK
TMNYHLKSLANKDYAANIVTNLNKKDQNFNNVITLMFLPTEQAVEKVIAADHEFLQKAWRCNIFPVGPAGLMNMLSFAKF
QITDHRRSENYKVIIEEVRKLLSSIGTMADYSQKIGNNIQNMVTNYDKFAASFNRNFMSRVKNINKLGIDSGNKAMPAAL
ERYQIVSSKSEIIEVEAANPPQIEEKL

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=258, Percent_Identity=25.5813953488372, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 48230; Mature: 48099

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYLLAVTAAILLILLALIILFYVKTKTLKRQLQFLSEQNLEISNNNQLLHQEKIGCLQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHH
IEQLKCKVEYQEQTIKDSKKIREESFSSAKAALFDLGKDLSKQLIEIHKMENTATRELAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNIATASGKFNSEFERLITMVGALHKDIEQSKDTVDLIKQSLLSPIGAGLLAEITLENIL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KSSGLRPNLDFIMQYGLTTTDSGKLRPDAIIFLPSDNLMVIDSKASKFLVNEQDNSGNLS
HHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCCHH
KTMNYHLKSLANKDYAANIVTNLNKKDQNFNNVITLMFLPTEQAVEKVIAADHEFLQKAW
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHCCHHHHHHHH
RCNIFPVGPAGLMNMLSFAKFQITDHRRSENYKVIIEEVRKLLSSIGTMADYSQKIGNNI
CCCCEECCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNMVTNYDKFAASFNRNFMSRVKNINKLGIDSGNKAMPAALERYQIVSSKSEIIEVEAAN
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC
PPQIEEKL
CCCCCCCC
>Mature Secondary Structure 
PYLLAVTAAILLILLALIILFYVKTKTLKRQLQFLSEQNLEISNNNQLLHQEKIGCLQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHH
IEQLKCKVEYQEQTIKDSKKIREESFSSAKAALFDLGKDLSKQLIEIHKMENTATRELAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNIATASGKFNSEFERLITMVGALHKDIEQSKDTVDLIKQSLLSPIGAGLLAEITLENIL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KSSGLRPNLDFIMQYGLTTTDSGKLRPDAIIFLPSDNLMVIDSKASKFLVNEQDNSGNLS
HHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCCHH
KTMNYHLKSLANKDYAANIVTNLNKKDQNFNNVITLMFLPTEQAVEKVIAADHEFLQKAW
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHCCHHHHHHHH
RCNIFPVGPAGLMNMLSFAKFQITDHRRSENYKVIIEEVRKLLSSIGTMADYSQKIGNNI
CCCCEECCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNMVTNYDKFAASFNRNFMSRVKNINKLGIDSGNKAMPAALERYQIVSSKSEIIEVEAAN
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCC
PPQIEEKL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]