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The map label for this gene is 157826099

Identifier: 157826099

GI number: 157826099

Start: 944984

End: 946237

Strand: Reverse

Name: 157826099

Synonym: A1C_05305

Alternate gene names: NA

Gene position: 946237-944984 (Counterclockwise)

Preceding gene: 157826100

Following gene: 157826095

Centisome position: 76.86

GC content: 33.57

Gene sequence:

>1254_bases
ATGAACTATGATTTAAGTACTAATTATACATATTATGTGTTAGAGGGGCTTAGAGCACAAATTGCTCCAATGCATTTAGG
TATAAAAATTCTAAAAGAACTGTATGAACATGAGTCTCTAGAAGATAACGGTTTTGCAAGAATTATGCATGCTTATTTAA
CACTTTGTGAACGCATGACTAGAAAATATACAAAACCTGAATTTAATATCCTTGACACAATTATTGATGATAAAACCTAT
AACATTAATGAAAAAGTTATATTAAAAAAGCCTTTTTGTGAACTAAGGCATTTTCAGAAAATAGGTTTTCAAAAAGAATT
ACCTAAATTATTAATAGTAGCACCCATGGCAGGACATCACGCTACTTTACTTAGATCAACCGTACAAGAATTATTACCAT
ATGCTGATATTTATATTACAGATTGGACGGAAGCAAGTTTCGTGCCGCTTGAAGCAGGGCATTTTGATATGGATGATTAT
ATTGATTACGTAATGGAGTTTATCAGTTTTATAGGACCTAATGTTCACACTATGGCAGTTTGCCAACCTACTGTGCCACT
GCTTGCTGCCATTAGCTTAATGTCGGAGAGTAATAGTCCAAATGTGCCGAGTTCGATGATTTTGATTGGGGGACCTATTG
ATGCTAGAAAAAACCCTACAGCAGTTAATGAATTTGCTCAAAGTAAAAGTTTAGAATGGTTTTGCAAAATGGTTACAATG
AAGGTGCCGCCAAACTATCCTGGTTATGGCAGAACAGTATATCCCGGCTTTCTCCAACTTGCCGGCTTTATGAGTTTAAA
CTTATTCCGTCACATAGATTCACATTTAGAATTATGGCAAAGTTTATTAAATTCTGATTATAAAAAAGCTGATCATACTA
TTAAATTTTATGATGAGTATTTAGCAGGTATGGATATGCCGGCAGAGTTTTACTTACAAACTATAGATGAAGTATTCCAA
CAATTTTCGTTAGCAAGAGGTAAATTAGTTTCTGAGAAGCGTCCGATCGATTTAAAACATATTACTAGATGTGCTTTACT
TGGTATTGAAGGGGAATTAGATGACATTGCAGCAGTAGGGCAAACAAAAGCTGCTTTAAAACTTTGTGCAAATATACCTG
AATCAATGAAAAGATACCATGTACAGAAAGGTGCAGGGCATTACGGGGTATTTAGCGGAAGTAAATTTAAACAGTTTATA
GTACCTATTATCAAAGATTTTATCTATGATTTTGATAAAACTAATTTCAAGTAA

Upstream 100 bases:

>100_bases
AATTTAAGACGTGAATCCTAAAATTAATGTTACTAAAGAAATTTTTGATGTTAAACTAAATAATTATATTAATTATTTTT
AGATTTAGGGATAAATTATG

Downstream 100 bases:

>100_bases
TCTAAACTTAAGGCAGTATAAAAATAGTGATTGCAAGGAAATTATGTAAGTAATTGACACAGCAAGGAAGAAAAAATTCT
GTAAATCAGAATTTTTTGTT

Product: Poly-beta-hydroxyalkanoate depolymerase

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; PHB De-Polymerase Domain-Containing Protein; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Poly(3-Hydroxyalkanoate)Synthetase; Polyhydroxybutanoate Depolymerase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxybutyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase Domain Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MNYDLSTNYTYYVLEGLRAQIAPMHLGIKILKELYEHESLEDNGFARIMHAYLTLCERMTRKYTKPEFNILDTIIDDKTY
NINEKVILKKPFCELRHFQKIGFQKELPKLLIVAPMAGHHATLLRSTVQELLPYADIYITDWTEASFVPLEAGHFDMDDY
IDYVMEFISFIGPNVHTMAVCQPTVPLLAAISLMSESNSPNVPSSMILIGGPIDARKNPTAVNEFAQSKSLEWFCKMVTM
KVPPNYPGYGRTVYPGFLQLAGFMSLNLFRHIDSHLELWQSLLNSDYKKADHTIKFYDEYLAGMDMPAEFYLQTIDEVFQ
QFSLARGKLVSEKRPIDLKHITRCALLGIEGELDDIAAVGQTKAALKLCANIPESMKRYHVQKGAGHYGVFSGSKFKQFI
VPIIKDFIYDFDKTNFK

Sequences:

>Translated_417_residues
MNYDLSTNYTYYVLEGLRAQIAPMHLGIKILKELYEHESLEDNGFARIMHAYLTLCERMTRKYTKPEFNILDTIIDDKTY
NINEKVILKKPFCELRHFQKIGFQKELPKLLIVAPMAGHHATLLRSTVQELLPYADIYITDWTEASFVPLEAGHFDMDDY
IDYVMEFISFIGPNVHTMAVCQPTVPLLAAISLMSESNSPNVPSSMILIGGPIDARKNPTAVNEFAQSKSLEWFCKMVTM
KVPPNYPGYGRTVYPGFLQLAGFMSLNLFRHIDSHLELWQSLLNSDYKKADHTIKFYDEYLAGMDMPAEFYLQTIDEVFQ
QFSLARGKLVSEKRPIDLKHITRCALLGIEGELDDIAAVGQTKAALKLCANIPESMKRYHVQKGAGHYGVFSGSKFKQFI
VPIIKDFIYDFDKTNFK
>Mature_417_residues
MNYDLSTNYTYYVLEGLRAQIAPMHLGIKILKELYEHESLEDNGFARIMHAYLTLCERMTRKYTKPEFNILDTIIDDKTY
NINEKVILKKPFCELRHFQKIGFQKELPKLLIVAPMAGHHATLLRSTVQELLPYADIYITDWTEASFVPLEAGHFDMDDY
IDYVMEFISFIGPNVHTMAVCQPTVPLLAAISLMSESNSPNVPSSMILIGGPIDARKNPTAVNEFAQSKSLEWFCKMVTM
KVPPNYPGYGRTVYPGFLQLAGFMSLNLFRHIDSHLELWQSLLNSDYKKADHTIKFYDEYLAGMDMPAEFYLQTIDEVFQ
QFSLARGKLVSEKRPIDLKHITRCALLGIEGELDDIAAVGQTKAALKLCANIPESMKRYHVQKGAGHYGVFSGSKFKQFI
VPIIKDFIYDFDKTNFK

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47713; Mature: 47713

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYDLSTNYTYYVLEGLRAQIAPMHLGIKILKELYEHESLEDNGFARIMHAYLTLCERMT
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
RKYTKPEFNILDTIIDDKTYNINEKVILKKPFCELRHFQKIGFQKELPKLLIVAPMAGHH
HHCCCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHCCCEEEEECCCCCH
ATLLRSTVQELLPYADIYITDWTEASFVPLEAGHFDMDDYIDYVMEFISFIGPNVHTMAV
HHHHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
CQPTVPLLAAISLMSESNSPNVPSSMILIGGPIDARKNPTAVNEFAQSKSLEWFCKMVTM
ECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHE
KVPPNYPGYGRTVYPGFLQLAGFMSLNLFRHIDSHLELWQSLLNSDYKKADHTIKFYDEY
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHH
LAGMDMPAEFYLQTIDEVFQQFSLARGKLVSEKRPIDLKHITRCALLGIEGELDDIAAVG
HCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHC
QTKAALKLCANIPESMKRYHVQKGAGHYGVFSGSKFKQFIVPIIKDFIYDFDKTNFK
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNYDLSTNYTYYVLEGLRAQIAPMHLGIKILKELYEHESLEDNGFARIMHAYLTLCERMT
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
RKYTKPEFNILDTIIDDKTYNINEKVILKKPFCELRHFQKIGFQKELPKLLIVAPMAGHH
HHCCCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHCCCEEEEECCCCCH
ATLLRSTVQELLPYADIYITDWTEASFVPLEAGHFDMDDYIDYVMEFISFIGPNVHTMAV
HHHHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
CQPTVPLLAAISLMSESNSPNVPSSMILIGGPIDARKNPTAVNEFAQSKSLEWFCKMVTM
ECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHE
KVPPNYPGYGRTVYPGFLQLAGFMSLNLFRHIDSHLELWQSLLNSDYKKADHTIKFYDEY
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHH
LAGMDMPAEFYLQTIDEVFQQFSLARGKLVSEKRPIDLKHITRCALLGIEGELDDIAAVG
HCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHC
QTKAALKLCANIPESMKRYHVQKGAGHYGVFSGSKFKQFIVPIIKDFIYDFDKTNFK
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA