| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is tuf
Identifier: 157826065
GI number: 157826065
Start: 914013
End: 915200
Strand: Reverse
Name: tuf
Synonym: A1C_05115
Alternate gene names: 157826065
Gene position: 915200-914013 (Counterclockwise)
Preceding gene: 157826074
Following gene: 157826064
Centisome position: 74.34
GC content: 39.56
Gene sequence:
>1188_bases ATGGCAAAAGCAAAATTTGAACGAACTAAACCGCACGTTAATATAGGTACGATCGGTCATGTAGATCACGGTAAGACTTC CTTAACGGCAGCAATAACTACAGTACTTGCTAAGACAGGTGGAGCAAAAGCTACAGCGTATGATCAAATTGACGCTGCTC CTGAAGAAAAAGAAAGAGGCATAACTATTTCTACCGCACACGTAGAGTATGAGACTAAAAATAGACACTATGCACACGTA GATTGTCCGGGACACGCTGACTATATAAAGAACATGATAACCGGTGCCGCTCAGATGGATGGTGCAATATTAGTAGTTTC TGCTGCTGATGGTCCAATGCTGCAAACTAGAGAACATATATTACTAGCAAAACAGGTAGGTGTACCTGCTATGGTGGTAT TCTTAAATAAAGTAGATGTGGTGGATGATCCTGCTCTATTAGAATTAGTAGAGATGGAAGTAAGGGACTTATTATTACAA TACGGTTTTCCGGCTTATGAAGTACCTATTATTAAAGGTTCTGCGCTTCAGGCCTTAGCAGGAAAGCCTGAAGGTGAAAA AGCTATTAATGAGTTAATGGATGCAGTAGATAATTATATACCGCATCCCGTAAGAGCTACTGATAAACCCTTCTTAATGC CGATAGAAGATGTATTCTCGATTTCAGGAAGAGGTACTGTTGTAACTGGTAGAGTAGAGTCAGGAATAATTAAGGTAGGT GAGGAAGTTGAAATAGTCGGTTTAAAAGAGACACAAAAAACTACCTGTACCGGTGTAGAAATGTTCAGGAAATTACTTGA TGAAGGACAAGCCGGAGATAATGTCGGTATATTACTACGTGGTACAAAAAGGGAAGAAGTTGAAAGAGGACAAGTTCTCG CAAAACCTGGTAGCATAAAACCGCATGATCAGTTTGAAGCTGAAGTATATGTGCTTAGTAAAGAAGAAGGTGGACGTCAT ACACCATTTACTAATGACTATCGTCCGCAGTTTTATTTTAGAACGACAGACGTTACCGGTACAATAAAATTGCCTGCTGA TAAGCAGATGGTGATGCCTGGAGATAATGCTACTACTTTTACAGTGGAATTAATTAAACCAATTGCTATGCAGCAAGGGT CAAAATTCTCTATACGTGAAGGTGGTAAAACAGTGGGTGCCGGCGTAGTAACTAAAATAAATAATTAA
Upstream 100 bases:
>100_bases GGGTTCGATTCCCATCACCCGCTCCAGAGATAGTGGTAATAAATAAATTTAGAAAAAAATTAACTTGTATTAAACCTAAA AAATTGTAGAGAGTAACAAT
Downstream 100 bases:
>100_bases TTTATTTTATAAATACCTATTATTTTTTAATAATGGGTATTTATATTTTAAGATGTCTGCAACACATCTGGCTGTTTAAA TATTAGGTTTACTGAATGAA
Product: elongation factor Tu
Products: GDP; phosphate
Alternate protein names: EF-Tu
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MAKAKFERTKPHVNIGTIGHVDHGKTSLTAAITTVLAKTGGAKATAYDQIDAAPEEKERGITISTAHVEYETKNRHYAHV DCPGHADYIKNMITGAAQMDGAILVVSAADGPMLQTREHILLAKQVGVPAMVVFLNKVDVVDDPALLELVEMEVRDLLLQ YGFPAYEVPIIKGSALQALAGKPEGEKAINELMDAVDNYIPHPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVG EEVEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSIKPHDQFEAEVYVLSKEEGGRH TPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNATTFTVELIKPIAMQQGSKFSIREGGKTVGAGVVTKINN
Sequences:
>Translated_395_residues MAKAKFERTKPHVNIGTIGHVDHGKTSLTAAITTVLAKTGGAKATAYDQIDAAPEEKERGITISTAHVEYETKNRHYAHV DCPGHADYIKNMITGAAQMDGAILVVSAADGPMLQTREHILLAKQVGVPAMVVFLNKVDVVDDPALLELVEMEVRDLLLQ YGFPAYEVPIIKGSALQALAGKPEGEKAINELMDAVDNYIPHPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVG EEVEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSIKPHDQFEAEVYVLSKEEGGRH TPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNATTFTVELIKPIAMQQGSKFSIREGGKTVGAGVVTKINN >Mature_394_residues AKAKFERTKPHVNIGTIGHVDHGKTSLTAAITTVLAKTGGAKATAYDQIDAAPEEKERGITISTAHVEYETKNRHYAHVD CPGHADYIKNMITGAAQMDGAILVVSAADGPMLQTREHILLAKQVGVPAMVVFLNKVDVVDDPALLELVEMEVRDLLLQY GFPAYEVPIIKGSALQALAGKPEGEKAINELMDAVDNYIPHPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGE EVEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSIKPHDQFEAEVYVLSKEEGGRHT PFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNATTFTVELIKPIAMQQGSKFSIREGGKTVGAGVVTKINN
Specific function: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
COG id: COG0050
COG function: function code J; GTPases - translation elongation factors
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily
Homologues:
Organism=Homo sapiens, GI34147630, Length=392, Percent_Identity=56.6326530612245, Blast_Score=471, Evalue=1e-133, Organism=Homo sapiens, GI4503475, Length=453, Percent_Identity=29.8013245033113, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI4503471, Length=453, Percent_Identity=29.3598233995585, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI223555963, Length=444, Percent_Identity=29.0540540540541, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI5729864, Length=444, Percent_Identity=29.0540540540541, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI54607086, Length=319, Percent_Identity=30.4075235109718, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI194018522, Length=443, Percent_Identity=26.410835214447, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI194018520, Length=443, Percent_Identity=26.410835214447, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI194097354, Length=443, Percent_Identity=26.410835214447, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI46094014, Length=443, Percent_Identity=26.410835214447, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI4503507, Length=268, Percent_Identity=29.4776119402985, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI82546879, Length=428, Percent_Identity=24.0654205607477, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1790412, Length=393, Percent_Identity=76.5903307888041, Blast_Score=591, Evalue=1e-170, Organism=Escherichia coli, GI1789737, Length=393, Percent_Identity=76.5903307888041, Blast_Score=591, Evalue=1e-170, Organism=Escherichia coli, GI2367247, Length=339, Percent_Identity=30.3834808259587, Blast_Score=138, Evalue=8e-34, Organism=Escherichia coli, GI48994988, Length=281, Percent_Identity=31.6725978647687, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789108, Length=267, Percent_Identity=27.7153558052434, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788922, Length=151, Percent_Identity=31.1258278145695, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17556456, Length=399, Percent_Identity=51.3784461152882, Blast_Score=385, Evalue=1e-107, Organism=Caenorhabditis elegans, GI25141371, Length=388, Percent_Identity=44.5876288659794, Blast_Score=336, Evalue=1e-92, Organism=Caenorhabditis elegans, GI17552884, Length=450, Percent_Identity=30.6666666666667, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17569207, Length=450, Percent_Identity=30.6666666666667, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI32566303, Length=431, Percent_Identity=29.2343387470998, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI115532067, Length=433, Percent_Identity=27.2517321016166, Blast_Score=127, Evalue=9e-30, Organism=Caenorhabditis elegans, GI115532065, Length=430, Percent_Identity=27.2093023255814, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI32566629, Length=456, Percent_Identity=25, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17506081, Length=271, Percent_Identity=29.1512915129151, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI32566301, Length=148, Percent_Identity=37.8378378378378, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17509919, Length=266, Percent_Identity=27.4436090225564, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17557151, Length=231, Percent_Identity=26.8398268398268, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17563834, Length=430, Percent_Identity=23.7209302325581, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324761, Length=397, Percent_Identity=64.9874055415617, Blast_Score=515, Evalue=1e-147, Organism=Saccharomyces cerevisiae, GI6325337, Length=450, Percent_Identity=30.8888888888889, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6319594, Length=450, Percent_Identity=30.8888888888889, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6322937, Length=349, Percent_Identity=26.9340974212034, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320377, Length=341, Percent_Identity=27.8592375366569, Blast_Score=90, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6320863, Length=275, Percent_Identity=26.5454545454545, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323320, Length=256, Percent_Identity=27.734375, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=175, Percent_Identity=28, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI281363316, Length=391, Percent_Identity=58.5677749360614, Blast_Score=476, Evalue=1e-134, Organism=Drosophila melanogaster, GI17864358, Length=391, Percent_Identity=58.5677749360614, Blast_Score=476, Evalue=1e-134, Organism=Drosophila melanogaster, GI19921738, Length=387, Percent_Identity=49.6124031007752, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI45553807, Length=456, Percent_Identity=30.9210526315789, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI45553816, Length=456, Percent_Identity=30.9210526315789, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24651721, Length=456, Percent_Identity=30.9210526315789, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI17864154, Length=456, Percent_Identity=30.9210526315789, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24652838, Length=453, Percent_Identity=30.242825607064, Blast_Score=168, Evalue=5e-42, Organism=Drosophila melanogaster, GI17137572, Length=453, Percent_Identity=30.242825607064, Blast_Score=168, Evalue=5e-42, Organism=Drosophila melanogaster, GI45550900, Length=434, Percent_Identity=26.9585253456221, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI17137380, Length=341, Percent_Identity=30.791788856305, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI19922690, Length=303, Percent_Identity=30.6930693069307, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24647046, Length=358, Percent_Identity=26.8156424581006, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24647048, Length=358, Percent_Identity=26.8156424581006, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI78706572, Length=305, Percent_Identity=27.5409836065574, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24582462, Length=146, Percent_Identity=32.1917808219178, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI28572034, Length=173, Percent_Identity=34.6820809248555, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: 20568 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): EFTU_RICAH (A8GPF2)
Other databases:
- EMBL: CP000847 - RefSeq: YP_001493785.1 - ProteinModelPortal: A8GPF2 - SMR: A8GPF2 - STRING: A8GPF2 - GeneID: 5645309 - GenomeReviews: CP000847_GR - KEGG: rak:A1C_05115 - NMPDR: fig|293614.3.peg.963 - eggNOG: COG0050 - HOGENOM: HBG307581 - OMA: FEGQVYV - ProtClustDB: PRK00049 - BioCyc: RAKA293614:A1C_05115-MONOMER - GO: GO:0005737 - HAMAP: MF_00118_B - InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR004541 - InterPro: IPR004160 - InterPro: IPR009000 - PANTHER: PTHR23115:SF31 - PRINTS: PR00315 - TIGRFAMs: TIGR00485 - TIGRFAMs: TIGR00231
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF03143 GTP_EFTU_D3; SSF50465 Elong_init_C; SSF50447 Translat_factor
EC number: 3.6.5.3
Molecular weight: Translated: 42891; Mature: 42760
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAKFERTKPHVNIGTIGHVDHGKTSLTAAITTVLAKTGGAKATAYDQIDAAPEEKERG CCCCCCCCCCCCEEECEEECCCCCCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCHHHCC ITISTAHVEYETKNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMLQTREHI EEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHCHHHCCCEEEEEECCCCCCHHHHHHE LLAKQVGVPAMVVFLNKVDVVDDPALLELVEMEVRDLLLQYGFPAYEVPIIKGSALQALA EEEHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHC GKPEGEKAINELMDAVDNYIPHPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCCCCEEEECCCCCCEEECC EEVEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSIK CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHCCCEEECCCCCC PHDQFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNATTF CCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEECCCCCEEE TVELIKPIAMQQGSKFSIREGGKTVGAGVVTKINN EEEEHHHHHHCCCCEEEECCCCCEECCEEEEEECC >Mature Secondary Structure AKAKFERTKPHVNIGTIGHVDHGKTSLTAAITTVLAKTGGAKATAYDQIDAAPEEKERG CCCCCCCCCCCEEECEEECCCCCCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCHHHCC ITISTAHVEYETKNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMLQTREHI EEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHCHHHCCCEEEEEECCCCCCHHHHHHE LLAKQVGVPAMVVFLNKVDVVDDPALLELVEMEVRDLLLQYGFPAYEVPIIKGSALQALA EEEHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHC GKPEGEKAINELMDAVDNYIPHPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCCCCEEEECCCCCCEEECC EEVEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSIK CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHCCCEEECCCCCC PHDQFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNATTF CCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEECCCCCEEE TVELIKPIAMQQGSKFSIREGGKTVGAGVVTKINN EEEEHHHHHHCCCCEEEECCCCCEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA