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The map label for this gene is rpsU [H]

Identifier: 157826011

GI number: 157826011

Start: 869215

End: 869415

Strand: Reverse

Name: rpsU [H]

Synonym: A1C_04825

Alternate gene names: 157826011

Gene position: 869415-869215 (Counterclockwise)

Preceding gene: 157826013

Following gene: 157826010

Centisome position: 70.62

GC content: 35.32

Gene sequence:

>201_bases
GTGATACTAGTAAATGTTCACGCCGGTAATTGTGACAATACGCTTAGGAATTTTAAGAAAAAGCTACAAAGAGAGCTTTA
TTTTCGTAAGATGAAAGAACAGCGTTATTATGAAACACCTTCAGCGAAGCGTGTTCGTAAAGCACAAGAAGCAGCAAGAA
GACAGAGAAAATTTGCTCGTAAAAAAATGTTTGATGAATAA

Upstream 100 bases:

>100_bases
TGGTGTTCTTTAATGCTCATATTTTTTAACCTTGACATATAACTTAATTATAGGGTATAGTCCAACGAACTACAATATCT
TTATAAGGAGAGTAATTTTA

Downstream 100 bases:

>100_bases
AATTTCAAATAATTTTAATACTAAATAAAAAGCTAGAAATATTAATATTTCTAGCTTTTTTGTTATGTAGATTGCTTTGT
AATTTTTCGTCATTGCAATG

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MILVNVHAGNCDNTLRNFKKKLQRELYFRKMKEQRYYETPSAKRVRKAQEAARRQRKFARKKMFDE

Sequences:

>Translated_66_residues
MILVNVHAGNCDNTLRNFKKKLQRELYFRKMKEQRYYETPSAKRVRKAQEAARRQRKFARKKMFDE
>Mature_66_residues
MILVNVHAGNCDNTLRNFKKKLQRELYFRKMKEQRYYETPSAKRVRKAQEAARRQRKFARKKMFDE

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001911
- ProDom:   PD005521 [H]

Pfam domain/function: PF01165 Ribosomal_S21 [H]

EC number: NA

Molecular weight: Translated: 8152; Mature: 8152

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILVNVHAGNCDNTLRNFKKKLQRELYFRKMKEQRYYETPSAKRVRKAQEAARRQRKFAR
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KKMFDE
HHCCCC
>Mature Secondary Structure
MILVNVHAGNCDNTLRNFKKKLQRELYFRKMKEQRYYETPSAKRVRKAQEAARRQRKFAR
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KKMFDE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA