| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is recG [H]
Identifier: 157825974
GI number: 157825974
Start: 829627
End: 831858
Strand: Reverse
Name: recG [H]
Synonym: A1C_04600
Alternate gene names: 157825974
Gene position: 831858-829627 (Counterclockwise)
Preceding gene: 157825976
Following gene: 157825965
Centisome position: 67.57
GC content: 36.02
Gene sequence:
>2232_bases ATGCTAACTATTCTAGAAAAATTTTTATTTTCTTCCATAAAAACGTTCATCAATATACGTGAAGATACCGTATATGCTTT GAAGAGGCTCGGTATTAATAATATTCGTGATTTATTATTTTATCTACCTGTGTCATACAAAAATAAAATATTATGGCCCA ATTTAACGGAAGTCAGAGACGGGGAAATAATACAAACGGAAATTGTAATTGAGAGTGTTAATTTACCGAAAAAAAGTAAT CAGCCTTTAAAAATTACGGCTAGCCATGATACCGGTTCTTTGTTATTAGTGTTTTTTCATAAACCACCACCGTTTATTTT TAATAAGCTGAAAGTCGGAACAAAGCATATTATTAGCGGTAAAGTACAATTTTTTGATCATTATTTGCAGATTTCGCATC CTGAATTTATTACGAATCCTAAACTTGCAAAAGAAATAGAGCCGATTTATTCCCTGACATACTTGCTTAGTAACAAGCAG CTATATTCATATATTATAAAAGCAATAGAGATATTTGAAGAGAAGTGTAAAGTGGTGGAAGATAAAGAAGTGAAAGAATA TTTGGATGAGATATTGCAGAGTTTGAATGTTTTGCATGTAAGAGAGGTTGTCATACAGTTGCTTGACCACGGTATCAATA AAAGCATAAAAAAAGACTGGATCCCGCGCTCAAGTCGCGGGATGACACAGGACAAATCTAGTAGGTATGACACTGAGTCG TTCAAAAAACAACTAGCAGCCAAAGAACTAATCGCCAATCAAATATCTCTTTTTAATGTACGTACACAAATGAGTAGAAG ACAAGGTAATATTTACATGAAAGCTGCAGCTATTCAAGCAAATATATTAAATGAGTTAGGATTTGAGTTAACGCAGTATC AAAAGCAAGTCATAGAAGAAATAGAGTTTGAGCAAAGCGATAAAGTAGAAATGATGAAATTACTGCAAGGTGATGTTGGC TCCGGTAAAACTCTGGTAGCTTTGCTTACGATTGTAAATGTGGTAAAAGCTGGATTTCAAGCAACGCTTATGGCTCCAAC CGATTTGCTTGCCAATCAGCATTATGAGTTTTGTGTTAAAGCTTTAAAAAATACTAATATAAGAATTGCGTTACTTACCG GTAAAATCCTTGGGGCAGCTCGAAAAAATATCATGCAGCAGCTCAAAAACGGCGAGATTGATATATTAGTCGGTACTCAT GCTTTATTTCAAGAGAAAGTAAGCTTTAAGAAGCTAGGTTATATAGTGATCGATGAGCAGCATAGATTTGGGGTACAGCA GCGTTTGAACCTGATAAATAAAGGACTAAATCCCGATGTTTTAGTTATGACCGCAACGCCGATTCCTCGTAGTCTTGCAC TTACTATGTTTGGTGATATGAGTATCTCAAAGCTAATGGGTAAGCCAAAAAATCGTTTGCCTATCGCTACAAATACCATG TCAGTTAATAAGATAGAACATATTATCGAATCGATAAATAAGAAGCTTATAGCAGGTGAGCGGGTATATTGGATTTGTCC ATTGGTAGAGCAGAGTCCCTCCCATGATGTCATACCGAGGCTTGACCCCGGTATACAGAAAAAAATTAAAAAAGACTGGA TCCTGTGTAGGAGCCACGGGATGACAATGGAGGAGGAGCAAGAGGATAGTTTATTAATGGATGTGATTAATCGTTTTAAC TCTATCGAAAATATATATCAAGGTTATACCGGTATTATTCACGGTAAGATGAAGAACGAGCAGAAAGAGCAAATAATGAA GCAGTTTAAGGCAGGTGAAATTAAGATATTAGTTGCAACAACTGTTATTGAAGTCGGAATAGACGTGCCTGAAGCGACTT TGATCATTATTGAAAACGCTGAGAGATTTGGTCTCGCTCAGTTGCATCAGCTTAGAGGTAGAGTAGGGCGAGGCTCGTTG CAGTCATATTGTATATTGCTCTATAATCCTAAAAGGCTTGGAAAAGTTGCACGAGGTAGGTTTGAGATAATGAAACAAAC TAATGATGGGTTTTATATTGCTGAGCAGGATTTAAAACTGCGAGGTAGCGGTGAGGTTTTAGGAGTAAAGCAAAGCGGTG AAATGGAGTTTTTCTTTGCTGATTTGGCAGAAGATTATGATCTATTACTTAAAGCTCATAAATTTGCGGCAATATGTTCA AAAGGTAATTTAAATTTTATTAACTTTCAGATAAGGCTTTTCGCCAAATCGCAAGTAAGTGAATTGGTTTAG
Upstream 100 bases:
>100_bases TTATAAAATAGCAAACAAATATAATCATGTAAACTAAAAATTCTTATTAATTTTCTTAGCAAAATCATTTAGAATATATG TTTTAGATTCTTTAAAATAT
Downstream 100 bases:
>100_bases GTTTAATGATTTTCGTCATTGCCGCAGCCACTTTATAGCTTTGCCATGACGATGTAGCAACGTTCGTACACTAGTGGCTG TACCAAATACTGATACTCAA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MLTILEKFLFSSIKTFINIREDTVYALKRLGINNIRDLLFYLPVSYKNKILWPNLTEVRDGEIIQTEIVIESVNLPKKSN QPLKITASHDTGSLLLVFFHKPPPFIFNKLKVGTKHIISGKVQFFDHYLQISHPEFITNPKLAKEIEPIYSLTYLLSNKQ LYSYIIKAIEIFEEKCKVVEDKEVKEYLDEILQSLNVLHVREVVIQLLDHGINKSIKKDWIPRSSRGMTQDKSSRYDTES FKKQLAAKELIANQISLFNVRTQMSRRQGNIYMKAAAIQANILNELGFELTQYQKQVIEEIEFEQSDKVEMMKLLQGDVG SGKTLVALLTIVNVVKAGFQATLMAPTDLLANQHYEFCVKALKNTNIRIALLTGKILGAARKNIMQQLKNGEIDILVGTH ALFQEKVSFKKLGYIVIDEQHRFGVQQRLNLINKGLNPDVLVMTATPIPRSLALTMFGDMSISKLMGKPKNRLPIATNTM SVNKIEHIIESINKKLIAGERVYWICPLVEQSPSHDVIPRLDPGIQKKIKKDWILCRSHGMTMEEEQEDSLLMDVINRFN SIENIYQGYTGIIHGKMKNEQKEQIMKQFKAGEIKILVATTVIEVGIDVPEATLIIIENAERFGLAQLHQLRGRVGRGSL QSYCILLYNPKRLGKVARGRFEIMKQTNDGFYIAEQDLKLRGSGEVLGVKQSGEMEFFFADLAEDYDLLLKAHKFAAICS KGNLNFINFQIRLFAKSQVSELV
Sequences:
>Translated_743_residues MLTILEKFLFSSIKTFINIREDTVYALKRLGINNIRDLLFYLPVSYKNKILWPNLTEVRDGEIIQTEIVIESVNLPKKSN QPLKITASHDTGSLLLVFFHKPPPFIFNKLKVGTKHIISGKVQFFDHYLQISHPEFITNPKLAKEIEPIYSLTYLLSNKQ LYSYIIKAIEIFEEKCKVVEDKEVKEYLDEILQSLNVLHVREVVIQLLDHGINKSIKKDWIPRSSRGMTQDKSSRYDTES FKKQLAAKELIANQISLFNVRTQMSRRQGNIYMKAAAIQANILNELGFELTQYQKQVIEEIEFEQSDKVEMMKLLQGDVG SGKTLVALLTIVNVVKAGFQATLMAPTDLLANQHYEFCVKALKNTNIRIALLTGKILGAARKNIMQQLKNGEIDILVGTH ALFQEKVSFKKLGYIVIDEQHRFGVQQRLNLINKGLNPDVLVMTATPIPRSLALTMFGDMSISKLMGKPKNRLPIATNTM SVNKIEHIIESINKKLIAGERVYWICPLVEQSPSHDVIPRLDPGIQKKIKKDWILCRSHGMTMEEEQEDSLLMDVINRFN SIENIYQGYTGIIHGKMKNEQKEQIMKQFKAGEIKILVATTVIEVGIDVPEATLIIIENAERFGLAQLHQLRGRVGRGSL QSYCILLYNPKRLGKVARGRFEIMKQTNDGFYIAEQDLKLRGSGEVLGVKQSGEMEFFFADLAEDYDLLLKAHKFAAICS KGNLNFINFQIRLFAKSQVSELV >Mature_743_residues MLTILEKFLFSSIKTFINIREDTVYALKRLGINNIRDLLFYLPVSYKNKILWPNLTEVRDGEIIQTEIVIESVNLPKKSN QPLKITASHDTGSLLLVFFHKPPPFIFNKLKVGTKHIISGKVQFFDHYLQISHPEFITNPKLAKEIEPIYSLTYLLSNKQ LYSYIIKAIEIFEEKCKVVEDKEVKEYLDEILQSLNVLHVREVVIQLLDHGINKSIKKDWIPRSSRGMTQDKSSRYDTES FKKQLAAKELIANQISLFNVRTQMSRRQGNIYMKAAAIQANILNELGFELTQYQKQVIEEIEFEQSDKVEMMKLLQGDVG SGKTLVALLTIVNVVKAGFQATLMAPTDLLANQHYEFCVKALKNTNIRIALLTGKILGAARKNIMQQLKNGEIDILVGTH ALFQEKVSFKKLGYIVIDEQHRFGVQQRLNLINKGLNPDVLVMTATPIPRSLALTMFGDMSISKLMGKPKNRLPIATNTM SVNKIEHIIESINKKLIAGERVYWICPLVEQSPSHDVIPRLDPGIQKKIKKDWILCRSHGMTMEEEQEDSLLMDVINRFN SIENIYQGYTGIIHGKMKNEQKEQIMKQFKAGEIKILVATTVIEVGIDVPEATLIIIENAERFGLAQLHQLRGRVGRGSL QSYCILLYNPKRLGKVARGRFEIMKQTNDGFYIAEQDLKLRGSGEVLGVKQSGEMEFFFADLAEDYDLLLKAHKFAAICS KGNLNFINFQIRLFAKSQVSELV
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=703, Percent_Identity=33.0014224751067, Blast_Score=373, Evalue=1e-104, Organism=Escherichia coli, GI1787357, Length=464, Percent_Identity=33.1896551724138, Blast_Score=243, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 84734; Mature: 84734
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTILEKFLFSSIKTFINIREDTVYALKRLGINNIRDLLFYLPVSYKNKILWPNLTEVRD CHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCCCCC GEIIQTEIVIESVNLPKKSNQPLKITASHDTGSLLLVFFHKPPPFIFNKLKVGTKHIISG CCEEEEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHCCCHHHHCC KVQFFDHYLQISHPEFITNPKLAKEIEPIYSLTYLLSNKQLYSYIIKAIEIFEEKCKVVE HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC DKEVKEYLDEILQSLNVLHVREVVIQLLDHGINKSIKKDWIPRSSRGMTQDKSSRYDTES CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHH FKKQLAAKELIANQISLFNVRTQMSRRQGNIYMKAAAIQANILNELGFELTQYQKQVIEE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHH IEFEQSDKVEMMKLLQGDVGSGKTLVALLTIVNVVKAGFQATLMAPTDLLANQHYEFCVK HCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCHHHHHHH ALKNTNIRIALLTGKILGAARKNIMQQLKNGEIDILVGTHALFQEKVSFKKLGYIVIDEQ HHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCEEEEECH HRFGVQQRLNLINKGLNPDVLVMTATPIPRSLALTMFGDMSISKLMGKPKNRLPIATNTM HHCCHHHHHHHHHCCCCCCEEEEECCCCCCHHEEHHHCCCHHHHHHCCCCCCCCEEECCC SVNKIEHIIESINKKLIAGERVYWICPLVEQSPSHDVIPRLDPGIQKKIKKDWILCRSHG CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC MTMEEEQEDSLLMDVINRFNSIENIYQGYTGIIHGKMKNEQKEQIMKQFKAGEIKILVAT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEE TVIEVGIDVPEATLIIIENAERFGLAQLHQLRGRVGRGSLQSYCILLYNPKRLGKVARGR EEHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHH FEIMKQTNDGFYIAEQDLKLRGSGEVLGVKQSGEMEFFFADLAEDYDLLLKAHKFAAICS HHHHHCCCCCEEEEECCEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHC KGNLNFINFQIRLFAKSQVSELV CCCCEEEEEEEEEEEHHHHHHCC >Mature Secondary Structure MLTILEKFLFSSIKTFINIREDTVYALKRLGINNIRDLLFYLPVSYKNKILWPNLTEVRD CHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCCCCC GEIIQTEIVIESVNLPKKSNQPLKITASHDTGSLLLVFFHKPPPFIFNKLKVGTKHIISG CCEEEEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHCCCHHHHCC KVQFFDHYLQISHPEFITNPKLAKEIEPIYSLTYLLSNKQLYSYIIKAIEIFEEKCKVVE HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC DKEVKEYLDEILQSLNVLHVREVVIQLLDHGINKSIKKDWIPRSSRGMTQDKSSRYDTES CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHH FKKQLAAKELIANQISLFNVRTQMSRRQGNIYMKAAAIQANILNELGFELTQYQKQVIEE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHH IEFEQSDKVEMMKLLQGDVGSGKTLVALLTIVNVVKAGFQATLMAPTDLLANQHYEFCVK HCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCHHHHHHH ALKNTNIRIALLTGKILGAARKNIMQQLKNGEIDILVGTHALFQEKVSFKKLGYIVIDEQ HHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCEEEEECH HRFGVQQRLNLINKGLNPDVLVMTATPIPRSLALTMFGDMSISKLMGKPKNRLPIATNTM HHCCHHHHHHHHHCCCCCCEEEEECCCCCCHHEEHHHCCCHHHHHHCCCCCCCCEEECCC SVNKIEHIIESINKKLIAGERVYWICPLVEQSPSHDVIPRLDPGIQKKIKKDWILCRSHG CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC MTMEEEQEDSLLMDVINRFNSIENIYQGYTGIIHGKMKNEQKEQIMKQFKAGEIKILVAT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEE TVIEVGIDVPEATLIIIENAERFGLAQLHQLRGRVGRGSLQSYCILLYNPKRLGKVARGR EEHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHH FEIMKQTNDGFYIAEQDLKLRGSGEVLGVKQSGEMEFFFADLAEDYDLLLKAHKFAAICS HHHHHCCCCCEEEEECCEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHC KGNLNFINFQIRLFAKSQVSELV CCCCEEEEEEEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]