| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825928
Identifier: 157825928
GI number: 157825928
Start: 780372
End: 780728
Strand: Reverse
Name: 157825928
Synonym: A1C_04340
Alternate gene names: NA
Gene position: 780728-780372 (Counterclockwise)
Preceding gene: 157825929
Following gene: 157825927
Centisome position: 63.42
GC content: 39.22
Gene sequence:
>357_bases GTGCTAAAGGATGGTAGTCAAGTTATCGCTAGTCATGCTCATATAGTAGAAGGAGTAATTAACATTGGAGAAAAAGTAAC AAAAGCTTATGATCCGGTTGATAAACTTCAGCAAGGTGCAAAAATTAAAGAAAAAGGCACCCCAAATCTTGGTATTGCCG ATAAGGTGCTTGATAAAATAAAAACTTTACCGAGTGCTGAAAGGGCAGCAAATGTATTCGAGACAACATATAAAACATTG GGTAGTAAGGCAGTAAAACGTACTGCAAAAATTGGTAGTGTCATGGTGTCGTTAGTCATTAACCCGACGCCGGTTGGACT TGGGCTTGCTGCTTTCTTTATCAGTCGTTGCTTATGA
Upstream 100 bases:
>100_bases AAATAAGCCAGCATGAAAAAGAACGCTGAAAGAGAATACGCTACTTTACGGTGCTAGAGTCGCTCGTGCCGGAATCACTG CAAGTGGAGTAGCAATTGAA
Downstream 100 bases:
>100_bases TGTCGTAAAGGAAACTTTAGAAGTAAGAGAAGATAAGTATTTAGATAAAGAGAAAAAAACTTTAGAAAATATTAAAGCTA ATTATGTAAAGCAAGCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLKDGSQVIASHAHIVEGVINIGEKVTKAYDPVDKLQQGAKIKEKGTPNLGIADKVLDKIKTLPSAERAANVFETTYKTL GSKAVKRTAKIGSVMVSLVINPTPVGLGLAAFFISRCL
Sequences:
>Translated_118_residues MLKDGSQVIASHAHIVEGVINIGEKVTKAYDPVDKLQQGAKIKEKGTPNLGIADKVLDKIKTLPSAERAANVFETTYKTL GSKAVKRTAKIGSVMVSLVINPTPVGLGLAAFFISRCL >Mature_118_residues MLKDGSQVIASHAHIVEGVINIGEKVTKAYDPVDKLQQGAKIKEKGTPNLGIADKVLDKIKTLPSAERAANVFETTYKTL GSKAVKRTAKIGSVMVSLVINPTPVGLGLAAFFISRCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12531; Mature: 12531
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDGSQVIASHAHIVEGVINIGEKVTKAYDPVDKLQQGAKIKEKGTPNLGIADKVLDKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHH KTLPSAERAANVFETTYKTLGSKAVKRTAKIGSVMVSLVINPTPVGLGLAAFFISRCL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLKDGSQVIASHAHIVEGVINIGEKVTKAYDPVDKLQQGAKIKEKGTPNLGIADKVLDKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHH KTLPSAERAANVFETTYKTLGSKAVKRTAKIGSVMVSLVINPTPVGLGLAAFFISRCL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA