| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825922
Identifier: 157825922
GI number: 157825922
Start: 768858
End: 769121
Strand: Direct
Name: 157825922
Synonym: A1C_04310
Alternate gene names: NA
Gene position: 768858-769121 (Clockwise)
Preceding gene: 157825921
Following gene: 157825924
Centisome position: 62.45
GC content: 28.41
Gene sequence:
>264_bases TTGGCCGGGTATAGCTCCTTTTTTTTTAGTTTCCCGGATGAAATCAGAAAAGTAATTTATACAACTAATGCTATTGAATC AATTAATCGTCAAATCAGAAAAATTATCAAGAATAAATGGGTGTTTCTAGATGATAAATCAATTCAAAAAATAATATTTT TAGCATTGACAAATGCTTCTAAGAAATGGACAATGCCAATTGAGAATTGGGCAATGGCTTTAAATCAATTTGCTATACTT TGTGATACTAATTTACAAAATTAG
Upstream 100 bases:
>100_bases TACATCTCTGTATAGTCCATATGATTAGGAATTCTGTACAGAGTTTTAGCAAAAAATTGGATAATAAATATCAAGTTATT TTTAATATAGGGCAGCGAAA
Downstream 100 bases:
>100_bases GCAAATGGAGAAATTCTACTTACACAAAGAATCTGACAGACTTGTGTAATCGATTAGAAATAGGTCATCATTAATAGTTT CACCTTCTTGCTCATCAATA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MAGYSSFFFSFPDEIRKVIYTTNAIESINRQIRKIIKNKWVFLDDKSIQKIIFLALTNASKKWTMPIENWAMALNQFAIL CDTNLQN
Sequences:
>Translated_87_residues MAGYSSFFFSFPDEIRKVIYTTNAIESINRQIRKIIKNKWVFLDDKSIQKIIFLALTNASKKWTMPIENWAMALNQFAIL CDTNLQN >Mature_86_residues AGYSSFFFSFPDEIRKVIYTTNAIESINRQIRKIIKNKWVFLDDKSIQKIIFLALTNASKKWTMPIENWAMALNQFAILC DTNLQN
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 10209; Mature: 10078
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGYSSFFFSFPDEIRKVIYTTNAIESINRQIRKIIKNKWVFLDDKSIQKIIFLALTNAS CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHEEECCCC KKWTMPIENWAMALNQFAILCDTNLQN CEECCCHHHHHHHHHHEEEEECCCCCC >Mature Secondary Structure AGYSSFFFSFPDEIRKVIYTTNAIESINRQIRKIIKNKWVFLDDKSIQKIIFLALTNAS CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHEEECCCC KKWTMPIENWAMALNQFAILCDTNLQN CEECCCHHHHHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]