| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825778
Identifier: 157825778
GI number: 157825778
Start: 638992
End: 639369
Strand: Reverse
Name: 157825778
Synonym: A1C_03545
Alternate gene names: NA
Gene position: 639369-638992 (Counterclockwise)
Preceding gene: 157825779
Following gene: 157825777
Centisome position: 51.94
GC content: 24.87
Gene sequence:
>378_bases ATGTCTATATATGCTAGTGATAAAGATATTTCAAGTCTACATATTACATCTGATACTTTAATTATTGATAGAACCAAACA AAAGGCAGAATATCTTGGAAATGTAGTTGTTTACTTCGATAATGCGATACTTAGAACGAAAGAATTATATATTTTTTATA AAACAATAGATAAAAAGCAAACTATTGATCATATAGTTGTTCCAACCAAATTGACTGTAGAAAGAAAAATAAATAATGAA TTATTACTTGCAGATAGTGTTAAATATTTTTTTGATGACAAACAACTTATTCTACTTGGTAATGTGATATTACAACGCGA CGATAATGTTTTAAAAACTAATAAACTAATCTATTATGTAGATCTTGTTAAGAAATAG
Upstream 100 bases:
>100_bases AATATAATGGATGAAACTAATATTATAATTTTTAAAGGCAATGTCTCCACAATCATCGATTTATCGGATTATTAAACTTG TAGTATTTCTTAATGTTAGT
Downstream 100 bases:
>100_bases AGTTCTTTAGTGTAGCATTGCTCGCATGGATATCTAGGTTATTAGTGCGAAAGCAGGAATCCATCTTAATACAAGTGAAT AATGGATTCCCGCTTTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSIYASDKDISSLHITSDTLIIDRTKQKAEYLGNVVVYFDNAILRTKELYIFYKTIDKKQTIDHIVVPTKLTVERKINNE LLLADSVKYFFDDKQLILLGNVILQRDDNVLKTNKLIYYVDLVKK
Sequences:
>Translated_125_residues MSIYASDKDISSLHITSDTLIIDRTKQKAEYLGNVVVYFDNAILRTKELYIFYKTIDKKQTIDHIVVPTKLTVERKINNE LLLADSVKYFFDDKQLILLGNVILQRDDNVLKTNKLIYYVDLVKK >Mature_124_residues SIYASDKDISSLHITSDTLIIDRTKQKAEYLGNVVVYFDNAILRTKELYIFYKTIDKKQTIDHIVVPTKLTVERKINNEL LLADSVKYFFDDKQLILLGNVILQRDDNVLKTNKLIYYVDLVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005653 [H]
Pfam domain/function: PF03968 OstA [H]
EC number: NA
Molecular weight: Translated: 14602; Mature: 14471
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYASDKDISSLHITSDTLIIDRTKQKAEYLGNVVVYFDNAILRTKELYIFYKTIDKKQ CEEECCCCCCCEEEEECCEEEEECCHHHHHHHCCEEEEECCEEEEEEEEEEEEEECCCCC TIDHIVVPTKLTVERKINNELLLADSVKYFFDDKQLILLGNVILQRDDNVLKTNKLIYYV CCCEEEECCEEEEEEECCCEEEEECCEEEEECCCEEEEEEEEEEECCCCEEECCEEEEEE DLVKK EEECC >Mature Secondary Structure SIYASDKDISSLHITSDTLIIDRTKQKAEYLGNVVVYFDNAILRTKELYIFYKTIDKKQ EEECCCCCCCEEEEECCEEEEECCHHHHHHHCCEEEEECCEEEEEEEEEEEEEECCCCC TIDHIVVPTKLTVERKINNELLLADSVKYFFDDKQLILLGNVILQRDDNVLKTNKLIYYV CCCEEEECCEEEEEEECCCEEEEECCEEEEECCCEEEEEEEEEEECCCCEEECCEEEEEE DLVKK EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]