| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825468
Identifier: 157825468
GI number: 157825468
Start: 343187
End: 344257
Strand: Direct
Name: 157825468
Synonym: A1C_01845
Alternate gene names: NA
Gene position: 343187-344257 (Clockwise)
Preceding gene: 157825463
Following gene: 157825471
Centisome position: 27.88
GC content: 28.29
Gene sequence:
>1071_bases ATGTCTGATTCAAAAAAATCAAGGGCTAGAAGAATATTTAATCAGTTAAAATCTTATTGGACTAGTTTTAGACAAAGTAA AATCGGTAAAATATTATTTAGCAATAGTTTAAGTTATGTAGTTTCCGTAGCTTCTATAGCAATTGCAGCTTCCGGGCTTT TTACTCCTATATCACCGATAATTATAGCTGTAGCTGTTGTTTCAGGAGTTAGCGTAGGAATTAAAGCTATAAATGAGACT TTGAACGTGCATGGTTTGCATAAACTTCATAAAGAGAATAATTTGTTAGTACATAACAGAAATGCTAAAAGTCAGCAAGA TTATATATTATCATTGGAACCAAGCTTAAAAGATATTTTGAAAAATGAATTATATACGCCGCAAATTGCAGGTAAGGATT GTACTCAAGATAAGTATGAGTTAAATGTAAATAAATTGAAAAGTACAGGACGAATATTTGGAAATAATTTGGGTGGAGCC GCAAATTTGGCTGTCTATATTATTAAAGGTGCTAGTGGTAATGTACTTGATATATTAAAAGCTACGTGTTACGGTGTAGT TACAACCGCATCATTAATGATCGACGGTCTTACTGAAAAGGAAAAAAGAGAAATAAAAGAAATATTTAAATTAAATATAA ATGAAGAATATAAAAAACAAGACACTCCTATATATGAAAATTTAGAAACATTAGAGCATTATACTAAAAATCAAGTATTG CAAACGTTGGCTTTAAGAAAATTAATAACGGATAAGAATTATTGGAGTATGAATAAAGACCAAAAAATACAAAAATTTCG AGAGATAAGAGGTAATTTTGAAATAAAAAGAAACGGTTTAGAAGAATTTTTTAAAGAAAATAAAATAACAATGGATAATA GAAAAGAGAGTTATGTTAAAGATATTAAAAATGTAATGAATCCATTTTATGACAAGCCTAGTAAAGCCGAAGTATGTAGT CCGTTAACTAAAGCCATGGATAAAGATAAAGTTAATAATGCTGAAATAAAAAGGACAAAACGTGAAAATTTAAAAAGGAT GCAAAAAAGAAAGCGAAATTTAACAATATGA
Upstream 100 bases:
>100_bases TTTATTAGAATTTATACTATAATTTAAGTTGTAAGAGAAGTGCATTAAATAAATAAAAGAAAAATTTATAAAAATATTTG TTCTTTGGAGAGAGAAATAA
Downstream 100 bases:
>100_bases AATGATTATTATAACTCGTTGCTAGTTACAAATTTGTAAGAGGTAGTATCGCTAAATATTCTATGCAATAATTCATTATT AAGAGCGTGGCTTGTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSDSKKSRARRIFNQLKSYWTSFRQSKIGKILFSNSLSYVVSVASIAIAASGLFTPISPIIIAVAVVSGVSVGIKAINET LNVHGLHKLHKENNLLVHNRNAKSQQDYILSLEPSLKDILKNELYTPQIAGKDCTQDKYELNVNKLKSTGRIFGNNLGGA ANLAVYIIKGASGNVLDILKATCYGVVTTASLMIDGLTEKEKREIKEIFKLNINEEYKKQDTPIYENLETLEHYTKNQVL QTLALRKLITDKNYWSMNKDQKIQKFREIRGNFEIKRNGLEEFFKENKITMDNRKESYVKDIKNVMNPFYDKPSKAEVCS PLTKAMDKDKVNNAEIKRTKRENLKRMQKRKRNLTI
Sequences:
>Translated_356_residues MSDSKKSRARRIFNQLKSYWTSFRQSKIGKILFSNSLSYVVSVASIAIAASGLFTPISPIIIAVAVVSGVSVGIKAINET LNVHGLHKLHKENNLLVHNRNAKSQQDYILSLEPSLKDILKNELYTPQIAGKDCTQDKYELNVNKLKSTGRIFGNNLGGA ANLAVYIIKGASGNVLDILKATCYGVVTTASLMIDGLTEKEKREIKEIFKLNINEEYKKQDTPIYENLETLEHYTKNQVL QTLALRKLITDKNYWSMNKDQKIQKFREIRGNFEIKRNGLEEFFKENKITMDNRKESYVKDIKNVMNPFYDKPSKAEVCS PLTKAMDKDKVNNAEIKRTKRENLKRMQKRKRNLTI >Mature_355_residues SDSKKSRARRIFNQLKSYWTSFRQSKIGKILFSNSLSYVVSVASIAIAASGLFTPISPIIIAVAVVSGVSVGIKAINETL NVHGLHKLHKENNLLVHNRNAKSQQDYILSLEPSLKDILKNELYTPQIAGKDCTQDKYELNVNKLKSTGRIFGNNLGGAA NLAVYIIKGASGNVLDILKATCYGVVTTASLMIDGLTEKEKREIKEIFKLNINEEYKKQDTPIYENLETLEHYTKNQVLQ TLALRKLITDKNYWSMNKDQKIQKFREIRGNFEIKRNGLEEFFKENKITMDNRKESYVKDIKNVMNPFYDKPSKAEVCSP LTKAMDKDKVNNAEIKRTKRENLKRMQKRKRNLTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40673; Mature: 40541
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSKKSRARRIFNQLKSYWTSFRQSKIGKILFSNSLSYVVSVASIAIAASGLFTPISPI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH IIAVAVVSGVSVGIKAINETLNVHGLHKLHKENNLLVHNRNAKSQQDYILSLEPSLKDIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECHHHHHHH KNELYTPQIAGKDCTQDKYELNVNKLKSTGRIFGNNLGGAANLAVYIIKGASGNVLDILK HHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHH ATCYGVVTTASLMIDGLTEKEKREIKEIFKLNINEEYKKQDTPIYENLETLEHYTKNQVL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH QTLALRKLITDKNYWSMNKDQKIQKFREIRGNFEIKRNGLEEFFKENKITMDNRKESYVK HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCHHHHHHH DIKNVMNPFYDKPSKAEVCSPLTKAMDKDKVNNAEIKRTKRENLKRMQKRKRNLTI HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDSKKSRARRIFNQLKSYWTSFRQSKIGKILFSNSLSYVVSVASIAIAASGLFTPISPI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH IIAVAVVSGVSVGIKAINETLNVHGLHKLHKENNLLVHNRNAKSQQDYILSLEPSLKDIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECHHHHHHH KNELYTPQIAGKDCTQDKYELNVNKLKSTGRIFGNNLGGAANLAVYIIKGASGNVLDILK HHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHH ATCYGVVTTASLMIDGLTEKEKREIKEIFKLNINEEYKKQDTPIYENLETLEHYTKNQVL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH QTLALRKLITDKNYWSMNKDQKIQKFREIRGNFEIKRNGLEEFFKENKITMDNRKESYVK HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCHHHHHHH DIKNVMNPFYDKPSKAEVCSPLTKAMDKDKVNNAEIKRTKRENLKRMQKRKRNLTI HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA