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The map label for this gene is bepC [H]

Identifier: 157825433

GI number: 157825433

Start: 311388

End: 312752

Strand: Direct

Name: bepC [H]

Synonym: A1C_01670

Alternate gene names: 157825433

Gene position: 311388-312752 (Clockwise)

Preceding gene: 157825428

Following gene: 157825434

Centisome position: 25.29

GC content: 36.19

Gene sequence:

>1365_bases
ATGCGTAAATTAGCTACATTTATTATCACATTATTACTAACCGGTTCGGCTACCGCTGTTGATTTGCAGGAAGCTTTAAC
TGCAGGATATAAGAATAATGAGGAGCTGAAAGCTGCTAGAATTAAATTTTTGAATGCGATTGAGCAATTTCCTCAAGCTT
TCTCAGGATTTATGCCTAGTGCCGGATTGCAGATTAATAGACAAAATAGTAAGACTAAATATAATAGAAAATATACTGAT
AAGCTTGGTCTTACTACAAGACAGACAGATAGCAATCAAGGTGCATTAACAATAGAGCAATCATTATTTAGCGGTGGTTC
TAGTGTTGCGGCTCTTAAAGCTGCTCAATCAGGGTTTAGAGCATCACGAGGCGAATATTATGCTGGCGAACAAAAAATAT
TATTAAATTTAATAACTGCTTATCTTGATTGTTTTGAGAGCAAAGAGAAATATGATATTTCTGAAAGTAGGGTTCGTACT
AACATACAACAAGTTAACACTGTTGAAGAGAAATTAAGATTAGGGGAAGCAACGGCAATAGATATAGCAACTGCAAGAGC
AGGGCTTGCAGCGGCAGAAACGAATAAATTAGCTGCCTATGCCGATTTTCAAGGCAAAAAAGCTAATTTTATTAGAGTAT
TCGGAATAGAGGCGACTGATCTAACTATGCCTAATTTACCTGATAAATTACCTGCTTCATTGGATGAGTTAACAAGAAAA
GCTGCTAAGTTCAATCCTGATATTGATTCGGCAAGGCATAATGTAATTTCGGCGAAAGCTTTGGAAATGGTGCAGAAAGG
AAAGTTATTGCCGCAAGTAAGCGTAAAGTTGCAATCAGGTAGAACTGACTATAATCCACAAGATCCAGCTGTACAAAATA
TAAACAATAAAAGCTATACTACTATTCTTTCGGTAAATATACCTATTTATCCAGATGGAGGAGCTCAATATTCAAGAATC
AGATCGGCTAAAAACCAAACAAGAAGTAGTGCAGTTCAGCTTGATAGTGCGATAAAGCAGACACAAGCGGGTGTTGTAAG
TGTGTGGGAAGGATTTGAAGCAGCAAAATCTCGTATTGTTGCAGCTAATCAAGGTGTAGATGCTGCACAAATATCATACG
ATGGTACAGTGCAAGAAGAAATAGTCGGCTCCAAAACTATACTAGATGTTTTAGACGCTGAGCAAAAATTGTATGAAGCA
AAAATAACTCGTGTGGATGCTTATAAGAATTCAGTACTTGCTGCATATCAAATGAAATTGTTAACCGGCGAGCTAACGGC
TCAAAGTTTAAAACTTAAAGTAAAATATTTTAGTCCTGAAGAAGAGTTTAAGACTATTAAAAAGAAAATGTTTATAGGTT
TCTAA

Upstream 100 bases:

>100_bases
CATTGCTACAATAGATTTATATTGTTTTATTGGGATATAGGTTAATTCTTGAAAGATTAAACTAATCTAACTAACATATT
ATCAATTATTCAAAAAATTT

Downstream 100 bases:

>100_bases
CGTGAGTAAGGAAAATAACAAGAAACAAGATATGTCTGTAGAAGACATATTAAAATCGATTAAAGGAGTAATTAACAAGC
ATAAAAATCATATTTATGAA

Product: TolC family type I secretion outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MRKLATFIITLLLTGSATAVDLQEALTAGYKNNEELKAARIKFLNAIEQFPQAFSGFMPSAGLQINRQNSKTKYNRKYTD
KLGLTTRQTDSNQGALTIEQSLFSGGSSVAALKAAQSGFRASRGEYYAGEQKILLNLITAYLDCFESKEKYDISESRVRT
NIQQVNTVEEKLRLGEATAIDIATARAGLAAAETNKLAAYADFQGKKANFIRVFGIEATDLTMPNLPDKLPASLDELTRK
AAKFNPDIDSARHNVISAKALEMVQKGKLLPQVSVKLQSGRTDYNPQDPAVQNINNKSYTTILSVNIPIYPDGGAQYSRI
RSAKNQTRSSAVQLDSAIKQTQAGVVSVWEGFEAAKSRIVAANQGVDAAQISYDGTVQEEIVGSKTILDVLDAEQKLYEA
KITRVDAYKNSVLAAYQMKLLTGELTAQSLKLKVKYFSPEEEFKTIKKKMFIGF

Sequences:

>Translated_454_residues
MRKLATFIITLLLTGSATAVDLQEALTAGYKNNEELKAARIKFLNAIEQFPQAFSGFMPSAGLQINRQNSKTKYNRKYTD
KLGLTTRQTDSNQGALTIEQSLFSGGSSVAALKAAQSGFRASRGEYYAGEQKILLNLITAYLDCFESKEKYDISESRVRT
NIQQVNTVEEKLRLGEATAIDIATARAGLAAAETNKLAAYADFQGKKANFIRVFGIEATDLTMPNLPDKLPASLDELTRK
AAKFNPDIDSARHNVISAKALEMVQKGKLLPQVSVKLQSGRTDYNPQDPAVQNINNKSYTTILSVNIPIYPDGGAQYSRI
RSAKNQTRSSAVQLDSAIKQTQAGVVSVWEGFEAAKSRIVAANQGVDAAQISYDGTVQEEIVGSKTILDVLDAEQKLYEA
KITRVDAYKNSVLAAYQMKLLTGELTAQSLKLKVKYFSPEEEFKTIKKKMFIGF
>Mature_454_residues
MRKLATFIITLLLTGSATAVDLQEALTAGYKNNEELKAARIKFLNAIEQFPQAFSGFMPSAGLQINRQNSKTKYNRKYTD
KLGLTTRQTDSNQGALTIEQSLFSGGSSVAALKAAQSGFRASRGEYYAGEQKILLNLITAYLDCFESKEKYDISESRVRT
NIQQVNTVEEKLRLGEATAIDIATARAGLAAAETNKLAAYADFQGKKANFIRVFGIEATDLTMPNLPDKLPASLDELTRK
AAKFNPDIDSARHNVISAKALEMVQKGKLLPQVSVKLQSGRTDYNPQDPAVQNINNKSYTTILSVNIPIYPDGGAQYSRI
RSAKNQTRSSAVQLDSAIKQTQAGVVSVWEGFEAAKSRIVAANQGVDAAQISYDGTVQEEIVGSKTILDVLDAEQKLYEA
KITRVDAYKNSVLAAYQMKLLTGELTAQSLKLKVKYFSPEEEFKTIKKKMFIGF

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=410, Percent_Identity=24.390243902439, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49853; Mature: 49853

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLATFIITLLLTGSATAVDLQEALTAGYKNNEELKAARIKFLNAIEQFPQAFSGFMPS
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGLQINRQNSKTKYNRKYTDKLGLTTRQTDSNQGALTIEQSLFSGGSSVAALKAAQSGFR
CCEEEECCCCCCCCCCCHHHHHCCEEECCCCCCCCEEEEHHHHCCCCHHHHHHHHHHCCC
ASRGEYYAGEQKILLNLITAYLDCFESKEKYDISESRVRTNIQQVNTVEEKLRLGEATAI
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
DIATARAGLAAAETNKLAAYADFQGKKANFIRVFGIEATDLTMPNLPDKLPASLDELTRK
EEHHHHCCCHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
AAKFNPDIDSARHNVISAKALEMVQKGKLLPQVSVKLQSGRTDYNPQDPAVQNINNKSYT
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCEE
TILSVNIPIYPDGGAQYSRIRSAKNQTRSSAVQLDSAIKQTQAGVVSVWEGFEAAKSRIV
EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEE
AANQGVDAAQISYDGTVQEEIVGSKTILDVLDAEQKLYEAKITRVDAYKNSVLAAYQMKL
EECCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGELTAQSLKLKVKYFSPEEEFKTIKKKMFIGF
HHHHHCCEEEEEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKLATFIITLLLTGSATAVDLQEALTAGYKNNEELKAARIKFLNAIEQFPQAFSGFMPS
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGLQINRQNSKTKYNRKYTDKLGLTTRQTDSNQGALTIEQSLFSGGSSVAALKAAQSGFR
CCEEEECCCCCCCCCCCHHHHHCCEEECCCCCCCCEEEEHHHHCCCCHHHHHHHHHHCCC
ASRGEYYAGEQKILLNLITAYLDCFESKEKYDISESRVRTNIQQVNTVEEKLRLGEATAI
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
DIATARAGLAAAETNKLAAYADFQGKKANFIRVFGIEATDLTMPNLPDKLPASLDELTRK
EEHHHHCCCHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
AAKFNPDIDSARHNVISAKALEMVQKGKLLPQVSVKLQSGRTDYNPQDPAVQNINNKSYT
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCEE
TILSVNIPIYPDGGAQYSRIRSAKNQTRSSAVQLDSAIKQTQAGVVSVWEGFEAAKSRIV
EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEE
AANQGVDAAQISYDGTVQEEIVGSKTILDVLDAEQKLYEAKITRVDAYKNSVLAAYQMKL
EECCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGELTAQSLKLKVKYFSPEEEFKTIKKKMFIGF
HHHHHCCEEEEEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]